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Chandana Basu Mallick

https://etis.ee/CV/Chandana_Basu Mallick/est
25.07.1980
cbm2577@gmail.com

Teenistuskäik

Töökohad ja ametid
20.09.2016–19.09.2018   
The Roslin Institute, University of Edinburgh, Edinburgh, UK, Marie Curie Fellow (1,00)
01.02.2015–15.09.2016   
Eesti Biokeskus, Erakorraline teadur (1,00)
01.01.2008–31.12.2013   
Eesti Biokeskus, Erakorraline teadur (0,50)
09.02.2003–28.02.2007   
Indian Institute of Natural Resins and Gums (IINRG), Namkum, Ranchi, India, DBT funded project (1,00)
 
 
Haridustee
17.04.2007–16.01.2015   
Doktorikraad (Molecular Biology), 2015, (juh) Richard Villems; Toomas Kivisild, Adaptatiivsete tunnuste geneetika ja soo-spetsiifilised demograafilised protsessid Lõuna-Aasia populatsioonides, Tartu Ülikool.
2001–2003   
Master of Science (M.Sc.), Biotechnology, APS University, Rewa, India
1998–2001   
Bachelor of Science (Microbiology, Hons) , University of Delhi, India

Kvalifikatsioon

Teaduskraadid
Chandana Basu Mallick, doktorikraad, 2015, (juh) Richard Villems; Toomas Kivisild, Genetics of adaptive traits and gender-specific demographic processes in South Asian populations (Adaptatiivsete tunnuste geneetika ja soo-spetsiifilised demograafilised protsessid Lõuna-Aasia populatsioonides), Tartu Ülikool.
Chandana Basu Mallick, magistrikraad (teaduskraad), 2003, (juh) , M.Sc Dissertation " Y-chromosome and mtDNA phylogeny among Oraon, Munda, Lohra and Chero tribes of Jharkhand", CCMB Hyderabad, M.Sc (Biotechnology) 2001- 2003, A.P.S University Rewa.
 
 
Teaduspreemiad ja tunnustused
2016, Chandana Basu Mallick, Awarded with the Marie Sklodowska-Curie actions- Individual fellowship for post-doctoral study, funded by EU under H2020 program for two years (Total amount funded- 195,455 euros)
2015, Chandana Basu Mallick, Third prize for the doctoral thesis in the Estonian National Student research competition 2015 (III preemia- üliõpilaste teadustööde riikliku konkursi)
2014, Chandana Basu Mallick, Won the travel award for participation in the EMBO meeting entitled “Human evolution in the genomic era: Origins, populations and phenotypes" held in UK (1st to 4th April, 2014)
2013, Chandana Basu Mallick, First position in Poster presentation at the TUMRI Annual conference 2013.
2012, Chandana Basu Mallick, Won the travel award to attend the 17th ESPCR (European Society of Pigment Cell Research) held in Geneva (11th – 13th Sept, 2012
2010, Chandana Basu Mallick, Received ESF Dora T8 fellowship for attending SMBE (Society for Molecular Biology and Evolution) conference in Lyon (4th to 8th July, 2010).
2003, Chandana Basu Mallick, University topper of M.Sc (Biotechnology) of A.P.S. University, Rewa
2003, Chandana Basu Mallick, Qualified GATE 2003 (Graduate Aptitude Test in Engineering) with a percentile score of 85.84
2000, Chandana Basu Mallick, Merit certificate for International Poster Contest-2000 organized by NCERT in collaboration with UNFPA (United Nations Population Fund)
2000, Chandana Basu Mallick, 2nd position in Poster contest during XXVIII All India Cultural, Literary and Sports festival- PULSE 2000 in AIIMS (All India Institute of Medical Science)
 
 
Teadustöö põhisuunad
ETIS KLASSIFIKAATOR: 1. Bio- ja keskkonnateadused; 1.3. Geneetika; CERCS KLASSIFIKAATOR: B220 Geneetika, tsütogeneetika
ETIS KLASSIFIKAATOR: 1. Bio- ja keskkonnateadused; 1.3. Geneetika; CERCS KLASSIFIKAATOR: B220 Geneetika, tsütogeneetika

Lõppenud projektid

Publikatsioonid

Klass
Aasta
Publikatsioon
 
1.1.
2016
Pagani, Luca; Lawson, Daniel John; Jagoda, Evelyn; Moerseburg, Alexander; Eriksson, Anders; Mitt, Mario; Clemente, Florian; Hudjashov, Georgi; DeGiorgio, Michael; Saag, Lauri; Wall, Jeffrey D.; Cardona, Alexia; Mägi, Reedik; Sayres, Melissa A. Wilson; Kaewert, Sarah; Inchley, Charlotte; Scheib, Christiana L.; Järve, Mari; Karmin, Monika; Jacobs, Guy S. ... Metspalu, Mait (2016). Genomic analyses inform on migration events during the peopling of Eurasia. Nature, 538 (7624), 238−257. DOI: 10.1038/nature19792.
1.1.
2013
Basu Mallick, C; Iliescu, FM; Möls, M, Hill; S, Tamang, R; Chaubey, G; Goto, R; Ho, SY; Gallego Romero, I; Crivellaro, F; Hudjashov, G; Rai, N; Metspalu, M; Mascie-Taylor, CG; Pitchappan, R; Singh, L; Mirazon-Lahr, M; Thangaraj, K; Villems, R; Kivisild, T. (2013). The Light Skin Allele of SLC24A5 in South Asians and Europeans Shares Identity by Descent. PLoS Genetics, 9 (11), e1003912.10.1371/journal.pgen.1003912.
1.1.
2012
Gallego Romero, I; Basu Mallick, C; Liebert, A; Crivellaro, F; Chaubey, G; Itan, Y; Metspalu, M; Eaaswarkhanth, M; Pitchappan, R; Villems, R; Reich, D; Singh, L; Thangaraj, K; Thomas, MG; Swallow, DM; Mirazon Lahr, M; Kivisild, T. (2012). Herders of Indian and European Cattle Share Their Predominant Allele for Lactase Persistence. Molecular Biology and Evolution, 29(1), 249−60.
1.1.
2011
Ranjan S.K., Mallick C.B., Saha D., Vidyarth A.S., and Ramani R. (2011). Genetic variation among species, races, forms and inbred lines of lac insects belonging to the genus Kerria (Homoptera, Tachardiidae). Genetics and Molecular Biology, 34 (Jul-Sep), 511−519.
1.1.
2011
Metspalu, M.; Romero, IG.; Yunusbayev, B.; Chaubey, G.; Mallick, CB.; Hudjashov, G.; Nelis, M.; Mägi, R.; Metspalu, E.; Remm, M.; Pitchappan, R.; Singh, L.; Thangaraj, K.; Villems, R.; Kivisild, T. (2011). Shared and unique components of human population structure and genome-wide signals of positive selection in South Asia. The American Journal of Human Genetics, 89 (6), 731−44.10.1016/j.ajhg.2011.11.010.
1.1.
2011
Chaubey, Gyaneshwer; Metspalu, Mait; Choi, Ying; Mägi, Reedik; Gallego Romero, Irene; Soares, Pedro; van Oven, Mannis; Behar, Doron M; Rootsi, Siiri; Hudjashov, Georgi; Basu Mallick, Chandana; Karmin, Monika; Nelis, Mari; Parik, Jüri; Goverdhana Reddy, Alla; Metspalu, Ene; vanDriem, George; Xue, Yali; Tyler-Smith, Chris; Thangaraj, Kumarasamy ... Kivisild, Toomas. (2011). Population Genetic Structure in Indian Austroasiatic speakers: The Role of Landscape Barriers and Sex-specific Admixture. Molecular Biology and Evolution, 28(2), 1013−24.
1.2.
2011
Saha D., Ranjan S.K., Mallick C.B., Vidyarthi A.S., Ramani R. (2011). Genetic diversity in lac resin-secreting insects belonging to Kerria spp., as revealed through ISSR markers. Biochemical Systematics and Ecology, 39 (2), 112−120.
1.1.
2008
Chaubey, G.; Karmin, M.; Metspalu, E.; Metspalu, M.; Selvi-Rani, D.; Singh, V.K.; Parik, J.; Solnik, A.; Naidu, B.P.; Kumar, A.; Adarsh, N.; Mallick, C.B., Trivedi, B.; Prakash, S.; Reddy, R.; Shukla, P.; Bhagat, S.; Verma, S.; Vasnik, S.; Khan, I.; Barwa, A. ... Villems, R. (2008). Phylogeography of mtDNA haplogroup R7 in the Indian peninsula. BMC Evolutionary Biology, 8 (227), x−x. DOI: 10.1186/1471-2148-8-227.
1.1.
2008
Thangaraj, K; Chaubey, G; Kivisild, T; Selvi Rani, D; Singh, VK; Ismail, T; Carvalho-Silva, D; Metspalu, M; Bhaskar, LV; Reddy, AG; Chandra, S; Pande, V; Prathap Naidu, B; Adarsh, N; Verma, A; Jyothi, IA; Mallick, CB; Shrivastava, N; Devasena, R; Kumari, B ... Singh, L. (2008). Maternal Footprints of Southeast Asians in North India. Human Heredity, 66 (1), 1−9.
1.1.
2005
Thangaraj, K.; Sridhar, V.; Kivisild, T.; Reddy, AG.; Chaubey, G.; Singh, VK.; Kaur, S.; Agarawal, P.; Rai, A.; Gupta, J.; Mallick, CB.; Kumar, N.; Velavan, TP.; Suganthan, R.; Udaykumar, D.; Kumar, R.; Mishra, R.; Khan, A.; Annapurna, C.; Singh, L. (2005). Different population histories of the Mundari- and Mon-Khmer-speaking Austro-Asiatic tribes inferred from the mtDNA 9-bp deletion/insertion polymorphism in Indian populations. Human Genetics, 116 (6), 507−517.
21.02.2020

Chandana Basu Mallick

https://etis.ee/CV/Chandana_Basu Mallick/eng
25.07.1980
cbm2577@gmail.com

Career

Institutions and positions
20.09.2016–19.09.2018   
The Roslin Institute, University of Edinburgh, Edinburgh, UK, Marie Curie Fellow (Post-Doc) (1,00)
01.02.2015–15.09.2016   
Estonian Biocentre, Extraordinary Researcher (1,00)
01.01.2008–31.12.2013   
Estonian Biocentre, Extraordinary Researcher (0,50)
09.02.2003–28.02.2007   
Indian Institute of Natural Resins and Gums (IINRG), Namkum, Ranchi, India, DBT funded project (1,00)
 
 
Education
17.04.2007–16.01.2015   
PhD (Molecular Biology), 2015, (sup) Richard Villems; Toomas Kivisild, Genetics of adaptive traits and gender-specific demographic processes in South Asian populations, University of Tartu.
2001–2003   
Master of Science (M.Sc.), Biotechnology, APS University, Rewa, India
1998–2001   
Bachelor of Science (Microbiology, Hons) , University of Delhi, India

Qualifications

Academic degrees
Chandana Basu Mallick, Doctor's Degree, 2015, (sup) Richard Villems; Toomas Kivisild, Genetics of adaptive traits and gender-specific demographic processes in South Asian populations, University of Tartu.
Chandana Basu Mallick, Research Master's Degree, 2003, (sup) , M.Sc Dissertation " Y-chromosome and mtDNA phylogeny among Oraon, Munda, Lohra and Chero tribes of Jharkhand", CCMB Hyderabad, M.Sc (Biotechnology) 2001- 2003, A.P.S University Rewa.
 
 
Honours & awards
2016, Chandana Basu Mallick, Awarded with the Marie Sklodowska-Curie actions- Individual fellowship for post-doctoral study, funded by EU under H2020 program for two years (Total amount funded- 195,455 euros)
2015, Chandana Basu Mallick, Third prize for the doctoral thesis in the Estonian National Student research competition 2015
2014, Chandana Basu Mallick, Won the travel award for participation in the EMBO meeting entitled “Human evolution in the genomic era: Origins, populations and pheno¬types" held in UK (1st to 4th April, 2014)
2013, Chandana Basu Mallick, First position in Poster presentation at the TUMRI Annual conference 2013.
2012, Chandana Basu Mallick, Won the travel award to attend the 17th ESPCR (European Society of Pigment Cell Research) held in Geneva (11th – 13th Sept, 2012
2010, Chandana Basu Mallick, Received ESF Dora T8 fellowship for attending SMBE (Society for Molecular Biology and Evolution) conference in Lyon (4th to 8th July, 2010).
2003, Chandana Basu Mallick, University topper of M.Sc (Biotechnology) of A.P.S. University, Rewa
2003, Chandana Basu Mallick, Qualified GATE 2003 (Graduate Aptitude Test in Engineering) with a percentile score of 85.84
2000, Chandana Basu Mallick, Merit certificate for International Poster Contest-2000 organized by NCERT in collaboration with UNFPA (United Nations Population Fund)
2000, Chandana Basu Mallick, 2nd position in Poster contest during XXVIII All India Cultural, Literary and Sports festival- PULSE 2000 in AIIMS (All India Institute of Medical Science), India
 
 
Fields of research
ETIS CLASSIFICATION: 1. Biosciences and Environment; 1.3. Genetics; CERCS CLASSIFICATION: B220 Genetics, cytogenetics
ETIS CLASSIFICATION: 1. Biosciences and Environment; 1.3. Genetics; CERCS CLASSIFICATION: B220 Genetics, cytogenetics
 
 

Completed projects

Publications

Category
Year
Publication
 
1.1.
2016
Pagani, Luca; Lawson, Daniel John; Jagoda, Evelyn; Moerseburg, Alexander; Eriksson, Anders; Mitt, Mario; Clemente, Florian; Hudjashov, Georgi; DeGiorgio, Michael; Saag, Lauri; Wall, Jeffrey D.; Cardona, Alexia; Mägi, Reedik; Sayres, Melissa A. Wilson; Kaewert, Sarah; Inchley, Charlotte; Scheib, Christiana L.; Järve, Mari; Karmin, Monika; Jacobs, Guy S. ... Metspalu, Mait (2016). Genomic analyses inform on migration events during the peopling of Eurasia. Nature, 538 (7624), 238−257. DOI: 10.1038/nature19792.
1.1.
2013
Basu Mallick, C; Iliescu, FM; Möls, M, Hill; S, Tamang, R; Chaubey, G; Goto, R; Ho, SY; Gallego Romero, I; Crivellaro, F; Hudjashov, G; Rai, N; Metspalu, M; Mascie-Taylor, CG; Pitchappan, R; Singh, L; Mirazon-Lahr, M; Thangaraj, K; Villems, R; Kivisild, T. (2013). The Light Skin Allele of SLC24A5 in South Asians and Europeans Shares Identity by Descent. PLoS Genetics, 9 (11), e1003912.10.1371/journal.pgen.1003912.
1.1.
2012
Gallego Romero, I; Basu Mallick, C; Liebert, A; Crivellaro, F; Chaubey, G; Itan, Y; Metspalu, M; Eaaswarkhanth, M; Pitchappan, R; Villems, R; Reich, D; Singh, L; Thangaraj, K; Thomas, MG; Swallow, DM; Mirazon Lahr, M; Kivisild, T. (2012). Herders of Indian and European Cattle Share Their Predominant Allele for Lactase Persistence. Molecular Biology and Evolution, 29(1), 249−60.
1.1.
2011
Ranjan S.K., Mallick C.B., Saha D., Vidyarth A.S., and Ramani R. (2011). Genetic variation among species, races, forms and inbred lines of lac insects belonging to the genus Kerria (Homoptera, Tachardiidae). Genetics and Molecular Biology, 34 (Jul-Sep), 511−519.
1.1.
2011
Metspalu, M.; Romero, IG.; Yunusbayev, B.; Chaubey, G.; Mallick, CB.; Hudjashov, G.; Nelis, M.; Mägi, R.; Metspalu, E.; Remm, M.; Pitchappan, R.; Singh, L.; Thangaraj, K.; Villems, R.; Kivisild, T. (2011). Shared and unique components of human population structure and genome-wide signals of positive selection in South Asia. The American Journal of Human Genetics, 89 (6), 731−44.10.1016/j.ajhg.2011.11.010.
1.1.
2011
Chaubey, Gyaneshwer; Metspalu, Mait; Choi, Ying; Mägi, Reedik; Gallego Romero, Irene; Soares, Pedro; van Oven, Mannis; Behar, Doron M; Rootsi, Siiri; Hudjashov, Georgi; Basu Mallick, Chandana; Karmin, Monika; Nelis, Mari; Parik, Jüri; Goverdhana Reddy, Alla; Metspalu, Ene; vanDriem, George; Xue, Yali; Tyler-Smith, Chris; Thangaraj, Kumarasamy ... Kivisild, Toomas. (2011). Population Genetic Structure in Indian Austroasiatic speakers: The Role of Landscape Barriers and Sex-specific Admixture. Molecular Biology and Evolution, 28(2), 1013−24.
1.2.
2011
Saha D., Ranjan S.K., Mallick C.B., Vidyarthi A.S., Ramani R. (2011). Genetic diversity in lac resin-secreting insects belonging to Kerria spp., as revealed through ISSR markers. Biochemical Systematics and Ecology, 39 (2), 112−120.
1.1.
2008
Chaubey, G.; Karmin, M.; Metspalu, E.; Metspalu, M.; Selvi-Rani, D.; Singh, V.K.; Parik, J.; Solnik, A.; Naidu, B.P.; Kumar, A.; Adarsh, N.; Mallick, C.B., Trivedi, B.; Prakash, S.; Reddy, R.; Shukla, P.; Bhagat, S.; Verma, S.; Vasnik, S.; Khan, I.; Barwa, A. ... Villems, R. (2008). Phylogeography of mtDNA haplogroup R7 in the Indian peninsula. BMC Evolutionary Biology, 8 (227), x−x. DOI: 10.1186/1471-2148-8-227.
1.1.
2008
Thangaraj, K; Chaubey, G; Kivisild, T; Selvi Rani, D; Singh, VK; Ismail, T; Carvalho-Silva, D; Metspalu, M; Bhaskar, LV; Reddy, AG; Chandra, S; Pande, V; Prathap Naidu, B; Adarsh, N; Verma, A; Jyothi, IA; Mallick, CB; Shrivastava, N; Devasena, R; Kumari, B ... Singh, L. (2008). Maternal Footprints of Southeast Asians in North India. Human Heredity, 66 (1), 1−9.
1.1.
2005
Thangaraj, K.; Sridhar, V.; Kivisild, T.; Reddy, AG.; Chaubey, G.; Singh, VK.; Kaur, S.; Agarawal, P.; Rai, A.; Gupta, J.; Mallick, CB.; Kumar, N.; Velavan, TP.; Suganthan, R.; Udaykumar, D.; Kumar, R.; Mishra, R.; Khan, A.; Annapurna, C.; Singh, L. (2005). Different population histories of the Mundari- and Mon-Khmer-speaking Austro-Asiatic tribes inferred from the mtDNA 9-bp deletion/insertion polymorphism in Indian populations. Human Genetics, 116 (6), 507−517.
21.02.2020

Otsi projekti

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Asutus on projekti finantseerija   Asutus on projekti teostaja  
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Kõik   Tavaprojektid   Ülemprojektid   Alamprojektid  
Uus Frascati (2015)
Uus ja vana Frascati (otsing uue järgi väljastab ka seotud vanad)
Kõik
Käimasolevad
Lõppenud
Algus
Hajus
Täpne
Lihtotsing Tühjenda
  • Leitud 1 kirjet
ProgrammLiikNumberNimiProjekti algusProjekti lõppVastutav täitjaAsutusFinantseerijapoolne rahastamine
IUTIUT24-1Täisgenoomse ajastu koidik arheogeneetikas 01.01.201431.12.2019Richard VillemsEesti Biokeskus; Tartu Ülikool, Tartu Ülikooli genoomika instituut1 386 400,00 EUR