See veebileht kasutab küpsiseid kasutaja sessiooni andmete hoidmiseks. Veebilehe kasutamisega nõustute ETISe kasutustingimustega. Loe rohkem
Olen nõus

Jaak Truu

https://etis.ee/CV/Jaak_Truu/est
3.06.1967
7375021
jaak.truu@ut.ee

Teenistuskäik

Töökohad ja ametid
01.09.2018–...   
Tartu Ülikool, Loodus- ja täppisteaduste valdkond, molekulaar- ja rakubioloogia instituut, mikrobioloogia professor (1,00)
01.09.2016–31.08.2018   
Tartu Ülikool, Loodus- ja täppisteaduste valdkond, ökoloogia ja maateaduste instituut, keskkonnatehnoloogia professor (1,00)
01.01.2016–31.08.2016   
Tartu Ülikool, Loodus- ja täppisteaduste valdkond, ökoloogia ja maateaduste instituut, keskkonnatehnoloogia professor (1,00)
01.02.2013–31.12.2015   
Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut, keskkonnatehnoloogia professor (1,00)
01.01.2012–31.01.2013   
Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut, keskkonnatehnoloogia professor (0,50)
01.01.2012–31.01.2013   
Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut, ökotehnoloogia vanemteadur (0,50)
01.09.2011–31.12.2012   
Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut, Vanemteadur (0,50)
01.09.2011–31.12.2011   
Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut, keskkonnatehnoloogia professor (0,10)
01.09.2011–31.12.2011   
Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut, ökotehnoloogia vanemteadur (0,90)
01.02.2011–31.08.2011   
Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut, ökotehnoloogia vanemteadur (1,00)
2010–31.08.2013   
Tervisetehnoloogiate Arenduskeskus AS (endine Reproduktiivmeditsiini TAK AS) , alamprojekti juht (0,10)
01.01.2008–31.01.2011   
Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Molekulaar- ja Rakubioloogia Instituut, geneetika vanemteadur (1,00)
01.09.2007–31.12.2007   
Tallinna Tehnikaülikool, Erakorraline dotsent (0,20)
01.02.2006–31.12.2007   
Tartu Ülikool, Bioloogia-geograafiateaduskond, Molekulaar- ja rakubioloogia instituut, geneetika vanemteadur (1,00)
2005–2006   
Tallinna Tehnikaülikool, TTÜ Tartu Kolledž, Dotsent (0,25)
01.09.2004–31.01.2006   
Tartu Ülikool, Bioloogia-geograafiateaduskond, Molekulaar- ja rakubioloogia instituut, geneetika teadur (1,00)
1998–2006   
Tartu Ülikool, Bioloogia-geograafiateaduskond, Molekulaar- ja rakubioloogia instituut, Teadur (1,00)
01.01.1992–31.12.1998   
Eesti Põllumajandusülikooli Keskkonnakaitse instituut, teadur
01.01.1991–31.12.1992   
Ökoloogia ja Mereuuringute Instituut
 
 
Haridustee
1994–2004   
filosoofiadoktor, Tartu Ülikool, mikrobioloogia eriala
1992–1994   
teadusmagister, Tartu Ülikool, hüdrobioloogia eriala
1985–1991   
diplom, Tartu Ülikool, mikrobioloogia eriala
 
 
Teadusorganisatsiooniline ja -administratiivne tegevus
2020−...   
Koostöövõrgustiku COST CA19123 Protection, Resilience, Rehabilitation of damaged environment juhtkomitee liige
2019−...   
Toimetuskollegiumi liige- Frontiers in Microbiology
2019−...   
Koostöövõrgustiku COST CA18131 Statistical and machine learning techniques in human microbiome studies juhtkomitee liige
2016−...   
Nordic Environmental Nucleotide Network - juhtkomitee liige
2015−...   
Euroopa teaduse ja tehnoloogiaalase koostöövõrgu (COST) Review Panel Member (Engineering and technology)
2014−...   
Toimetuskolleegiumi liige - Journal of Environmental Engineering and Landscape Management
2006−...   
Põllumajandusministeeriumi uuendtoidu komisjoni liige
2005−...   
Eesti Mikrobioloogide Ühenduse juhatuse esimees
2012−2015   
Koostöövõrgu COST TD1107 'Biochar as option for sustainable resource management' juhtkomitee liige
2011−2015   
Koostöövõrgu COST ES1103 'Microbial ecology & the earth system: collaborating for insight and success with the new generation of sequencing tools' juhtkomitee liige
2009−2011   
Haridus- ja teadusministeeriumi humanitaar- ja loodusteaduste rahvuslike kollektsioonide ekspertnõukogu liige
2006−2014   
Euroopa Teadusfondi teaduse ja tehnoloogiaalase koostöövõrgu (COST) biomeditsiini ja molekulaarsete bioteaduste valdkonna komitee ekspert
2005−2009   
Koostöövõrgu COST 859 ’Phytotechnologies’ (Taimetehnoloogiad) juhtkomitee liige
 
 
Loometöö
..
 
 
Lisainfo
Loengukursused: Bioloogilised protsessid ökotehnoloogias, Keskkonna mikrobioloogia,Keskkonnatehnoloogiad, Bioloogilised protsessid ökotehnoloogias praktikum, Mikrobioom ja keskkonnagenoomika

Kvalifikatsioon

Teaduskraadid
Jaak Truu, doktorikraad, 2004, (juh) Ain Heinaru, Oil shale industry wastewater: impact on river microbial community and possibilities for bioremediation (Põlevkivitööstuse heitveed: mõju jõgede mikroobikooslusele ja bioremediatsiooni võimalused), Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Molekulaar- ja Rakubioloogia Instituut, Geneetika õppetool.
 
 
Teadustöö põhisuunad
ETIS KLASSIFIKAATOR: 1. Bio- ja keskkonnateadused; 1.2. Mikrobioloogia
 
 
Lisainfo
filosoofia doktor (PhD)
Tartu Ülikool, mikrobioloogia eriala, 2004

Jooksvad projektid

Lõppenud projektid

Juhendamisel väitekirjad

Juhendatud väitekirjad

Publikatsioonid

Klass
Aasta
Publikatsioon
 
1.1.
2021
Devarajan, Arun Kumar; Muthukrishanan, Gomathy; Truu, Jaak; Truu, Marika; Ostonen, Ivika; S., Subramanian Kizhaeral; Panneerselvam, Periyasamy; Gopalasubramanian, Sabarinathan Kuttalingam; (2021). The Foliar Application of Rice Phyllosphere Bacteria induces Drought-Stress Tolerance in Oryza sativa (L.). In: Plants. DOI: 10.3390/plants10020387.
1.1.
2021
Marcos-Zambrano, Laura Judith; Karaduzovic-Hadziabdic, Kanita; Loncar Turukalo, Tatjana; Przymus, Piotr; Trajkovik, Vladimir; Aasmets, Oliver; Berland, Magali; Gruca, Aleksandra; Hasic, Jasminka; Hron, Karel; Klammsteiner, Thomas; Kolev, Mikhail; Lahti, Leo; Lopes, Marta B.; Moreno, Victor; Naskinova, Irina; Org, Elin; Paci??ncia, In??s; Papoutsoglou, Georgios; Shigdel, Rajesh ... (2021). Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment. Frontiers in Microbiology , 12, 313. DOI: 10.3389/fmicb.2021.634511.
1.1.
2021
Moreno-Indias, Isabel; Lahti, Leo; Nedyalkova, Miroslava; Elbere, Ilze; Roshchupkin, Gennady; Adilovic, Muhamed; Aydemir, Onder; Bakir-Gungor, Burcu; Santa Pau, Enrique Carrillo-de; D???Elia, Domenica; Desai, Mahesh S.; Falquet, Laurent; Gundogdu, Aycan; Hron, Karel; Klammsteiner, Thomas; Lopes, Marta B.; Marcos-Zambrano, Laura Judith; Marques, Cl??udia; Mason, Michael; May, Patrick ... (2021). Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions. Frontiers in Microbiology , 12, 277. DOI: 10.3389/fmicb.2021.635781.
1.1.
2021
Tiirik, K.; Nõlvak, H.; Truu, M.; Peeb, A.; Kõiv-Vainik, M.; Truu, J. (2021). The effect of the effluent from a small-scale conventional wastewater treatment plant treating municipal wastewater on the composition and abundance of the microbial community, antibiotic resistome, and pathogens in the sediment and water of a receiving stream. Water (Switzerland), 13 (6). DOI: 10.3390/w13060865.
1.1.
2021
Samaddar, S.; Truu, J.; Chatterjee, P.; Oopkaup, K.; Truu, M.; Kim, K.; Kim, S.; Schmidt, R.; Roy Choudhury, A.; Choi, J.; Sa, T. (2021). Long-term inorganic nitrogen application changes the ammonia-oxidizing archaeal community composition in paddy soils. European Journal of Soil Science. DOI: 10.1111/ejss.13112.
1.1.
2020
Kanger, K.; Guilford, N.G.H.; Lee, H.W.; Nesbø, C.L.; Truu, J.; Edwards, E.A. (2020). Antibiotic resistome and microbial community structure during anaerobic co-digestion of food waste, paper and cardboard. FEMS Microbiology Ecology, 96 (2). DOI: 10.1093/femsec/fiaa006.
1.1.
2020
Kundel, Dominika; Bodenhausen, Natacha; Jørgensen, Helene Bracht; Truu, Jaak; Birkhofer, Klaus; Hedlund, Katarina; Mäder, Paul; Fliessbach, Andreas (2020). Effects of simulated drought on biological soil quality, microbial diversity and yields under long-term conventional and organic agriculture. FEMS Microbiology Ecology. DOI: 10.1093/femsec/fiaa205.
1.1.
2020
Truu, Marika; Nõlvak, Hiie; Ostonen, Ivika; Oopkaup, Kristjan; Maddison, Martin; Ligi, Teele; Espenberg, Mikk; Uri, Veiko; Mander, Ülo; Truu, Jaak (2020). Soil Bacterial and Archaeal Communities and Their Potential to Perform N-Cycling Processes in Soils of Boreal Forests Growing on Well-Drained Peat. Frontiers in Microbiology, 11. DOI: 10.3389/fmicb.2020.591358.
1.1.
2019
Truu, Marika; Oopkaup, Kristjan; Krustok, Ivo; Kõiv-Vainik, Margit; Nõlvak, Hiie; Truu, Jaak (2019). Bacterial community activity and dynamics in the biofilm of an experimental hybrid wetland system treating greywater. Environmental Science and Pollution Research, 26 (4), 4013−4026. DOI: 10.1007/s11356-018-3940-8.
1.1.
2019
Jorgensen, K. S.; Kreutzer, A.; Lehtonen, K. K.; Kankaanpaa, H.; Rytkonen, J.; Wegeberg, S.; Gustavson, K.; Fritt-Rasmussen, J.; Truu, J.; Kouts, T.; Lilover, M.-J.; Seiler, T.-B.; Hollert, H.; Johann, S.; Marigomez, J.; Soto, M.; Lekube, X.; Jenssen, B. M.; Ciesielski, T. M.; Wilms, L. B. ... Wang, F. (2019). The EU Horizon 2020 project GRACE: integrated oil spill response actions and environmental effects. Environmental Sciences Europe, 31 (44), 1−10. DOI: 10.1186/s12302-019-0227-8.
1.1.
2019
Joe, Manoharan Melvin; Gomathi, Ram; Benson, Abitha; Shalini, Devaraj; Rengasamy, Parthasarathi; Henry, Allen John; Truu, Jaak; Truu, Marika; Sa, Tongmin (2019). Simultaneous Application of Biosurfactant and Bioaugmentation with Rhamnolipid-Producing Shewanella for Enhanced Bioremediation of Oil-Polluted Soil. Applied Sciences-basel, 9 (18), ARTN 3773. DOI: 10.3390/app9183773.
1.1.
2019
Abdalla, Mohamed; Hastings, Astley; Cheng, Kun; Yue, Qian; Chadwick, Dave; Espenberg, Mikk; Truu, Jaak; Rees, Robert M.; Smith, Pete (2019). A critical review of the impacts of cover crops on nitrogen leaching, net greenhouse gas balance and crop productivity. Global Change Biology, 25 (8), 2530−2543. DOI: 10.1111/gcb.14644.
1.1.
2019
Samaddar, Sandipan; Chatterjee, Poulami; Truu, Jaak; Anandham, Rangasamy; Kim, Sukjin; Sa, Tongmin (2019). Long-term phosphorus limitation changes the bacterial community structure and functioning in paddy soils. Applied Soil Ecology, 134, 111−115. DOI: 10.1016/j.apsoil.2018.10.016.
1.1.
2019
Štšepetova, Jelena; Truu, Jaak; Runnel, Riina; Nõmmela, Rita; Saag, Mare; Olak, Jana; Nõlvak, Hiie; Preem, Jens-Konrad; Oopkaup, Kristjan; Krjutškov, Kaarel; Honkala, Eino; Honkala, Sisko; Mäkinen, Kauko; Mäkinen, Pirkko-Liisa; Vahlberg, Tero; Vermeiren, Joan; Bosscher, Douwina; de Cock, Peter; Mändar, Reet (2019). Impact of polyols on Oral microbiome of Estonian schoolchildren. BMC Oral Health, 19, ARTN 60. DOI: 10.1186/s12903-019-0747-z.
1.1.
2019
Samaddar, Sandipan; Truu, Jaak; Chatterjee, Poulami; Truu, Marika; Kim, Kiyoon; Kim, Sukjin; Seshadri, Sundaram; Sa, Tongmin (2019). Long-term silicate fertilization increases the abundance of Actinobacterial population in paddy soils. Biology and Fertility of Soils, 55 (2), 109−120. DOI: 10.1007/s00374-018-01335-6.
1.1.
2018
Pärn, Jaan; Verhoeven, Jos T. A.; Butterbach-Bahl, Klaus; Dise, Nancy B.; Ullah, Sami; Aasa, Anto; Egorov, Sergey; Espenberg, Mikk; Järveoja, Järvi; Jauhiainen, Jyrki; Kasak, Kuno; Klemedtsson, Leif; Kull, Ain; Laggoun-Défarge, Fatima; Lapshina, Elena D.; Lohila, Annalea; Lõhmus, Krista; Maddison, Martin; Mitsch, William J.; Müller, Christoph ... Mander, Ülo (2018). Nitrogen-rich organic soils under warm well-drained conditions are global nitrous oxide emission hotspots. Nature Communications, 9, Article number: 1135. DOI: 10.1038/s41467-018-03540-1.
1.1.
2018
Espenberg, Mikk; Truu, Marika; Mander, Ülo; Kasak, Kuno; Nõlvak, Hiie; Ligi, Teele; Oopkaup, Kristjan; Maddison, Martin; Truu, Jaak (2018). Differences in microbial community structure and nitrogen cycling in natural and drained tropical peatland soils. Scientific Reports, 8, ARTN 4742. DOI: 10.1038/s41598-018-23032-y.
1.1.
2018
Nõlvak, Hiie; Truu, Marika; Oopkaup, Kristjan; Kanger, Kärt; Krustok, Ivo; Nehrenheim, Emma; Truu, Jaak (2018). Reduction of antibiotic resistome and integron-integrase genes in laboratory-scale photobioreactors treating municipal wastewater. Water Research, 142, 363−372. DOI: 10.1016/j.watres.2018.06.014.
1.1.
2018
Tipayno, Sherlyn C.; Truu, Jaak; Samaddar, Sandipan; Truu, Marika; Preem, Jens-Konrad; Oopkaup, Kristjan; Espenberg, Mikk; Chatterjee, Poulami; Kang, Yeongyeong; Kim, Kiyoon; Sa, Tongmin (2018). The bacterial community structure and functional profile in the heavy metal contaminated paddy soils, surrounding a nonferrous smelter in South Korea. Ecology and Evolution, 8 (12), 6157−6168. DOI: 10.1002/ece3.4170.
1.1.
2017
Mändar, Reet; Punab, Margus; Korrovits, Paul; Türk, Silver; Ausmees, Kristo; Lapp, Eleri; Preem, Jens-Konrad; Oopkaup, Kristjan; Salumets, Andres; Truu, Jaak. (2017). Seminal microbiome in men with and without prostatitis. International Journal of Urology, 24 (3), 211−216. DOI: 10.1111/iju.13286.
1.1.
2017
Ostonen, Ivika; Truu, Marika; Helmisaari, Heljä-Sisko; Lukac, Martin; Vanguelova, Elena; Godbold, Douglas L; Lõhmus, Krista; Zang, Ulrich, Tedersoo, Leho; Preem, Jens-Konrad; Rosenvald, Katrin; Aosaar, Jürgen; Armolaitis, Kestutis; Frey, Jane; Kabral, Naima; Kukumägi, Mai; Leppälammi-Kujansuu, Jaana; Lindroos, Antti-Jussi; Merilä, Päivi; Napa, Ülle; Nöjd, Pekka ... Truu, Jaak (2017). Adaptive root foraging strategies along a boreal-temperate forest gradient. New Phytologist, 215 (3), 977−991. DOI: 10.1111/nph.14643.
5.2.
2017
Mander, Ü.; Maddison, M.; Truu, M.; Truu, J.; Espenberg, M.; Teemusk, A; Torga, R; Soosaar, K; Uri, V. (2017). Full-drained peatland forests as nitrous oxide sources. Geophysical Research Abstracts, 19: European Geosciences Union General Assembly 2017. Vienna: European Geosciences Union, 1−1. (EGU2017-5266).
1.1.
2016
Krustok, I.; Odlare, M.; Truu, J.; Nehrenheim, E. (2016). Inhibition of nitrification in municipal wastewater-treating photobioreactors: Effect on algal growth and nutrient uptake. Bioresource Technology, 202, 238−243. DOI: 10.1016/j.biortech.2015.12.020.
1.1.
2016
Nõlvak, H.; Truu, M.; Kanger, K.; Tampere, M.; Espenberg, M.; Loit, E.; Raave, H.; Truu, J. (2016). Inorganic and organic fertilizers impact the abundance and proportion of antibiotic resistance and integron-integrase genes in agricultural grassland soil. The Science of The Total Environment, 562, 678−689. DOI: 10.1016/j.scitotenv.2016.04.035.
1.1.
2016
Abdalla, Mohamed; Hastings, Astley; Truu, Jaak; Espenberg, Mikk; Mander, Ülo; Smith, Pete (2016). Emissions of methane from northern peatlands: a review of management impacts and implications for future management options. Ecology and Evolution, 1−23. DOI: 10.1002/ece3.2469.
1.1.
2016
Oopkaup, Kristjan; Truu, Marika; Nõlvak, Hiie; Ligi, Teele; Preem, Jens-Konrad; Mander, Ülo; Truu, Jaak; (2016). Dynamics of Bacterial Community Abundance and Structure in Horizontal Subsurface Flow Wetland Mesocosms Treating Municipal Wastewater. Water, 8 (10), 457. DOI: 10.3390/w8100457.
1.1.
2016
Espenberg, Mikk; Truu, Marika; Truu, Jaak; Maddison, Martin; Nõlvak, Hiie; Järveoja, Järvi; Mander, Ülo (2016). Impact of Reed Canary Grass Cultivation and Mineral Fertilisation on the Microbial Abundance and Genetic Potential for Methane Production in Residual Peat of an Abandoned Peat Extraction Area. PLoS ONE, 11 (9), e0163864−e0163864. DOI: 10.1371/journal.pone.0163864.
2.4.
2016
Kriipsalu, M.; Maastik, A.; Truu, J. (2016). Jäätmekäitlus ja pinnase tervendamine. Tallinn 2016: TTÜ kirjastus.
1.1.
2015
Mändar, Reet; Punab, Margus; Borovkova, Natalja; Lapp, Eleri; Kiiker, Riinu; Korrovits, Paul; Metspalu, Andres; Krjutškov, Kaarel; Nõlvak, Hiie; Preem, Jens-Konrad; Oopkaup, Kristjan; Salumets, Andres; Truu, Jaak. (2015). Complementary seminovaginal microbiome in couples. Research in Microbiology, 166 (5), 440−447. DOI: 10.1016/j.resmic.2015.03.009.
1.1.
2015
Smidt, Imbi; Kiiker, Riinu; Oopkaup, Helen; Lapp, Eleri; Rööp, Tiiu; Truusalu, Kai; Štšepetova, Jelena; Truu, Jaak; Mändar, Reet. (2015). Comparison of detection methods for vaginal lactobacilli. Beneficial Microbes, 6 (5), 747−751. DOI: 10.3920/BM2014.0154.
1.1.
2015
Krustok, Ivo; Odlare, Monica; Shabiimam, M.A.; Truu, Jaak; Truu, Marika; Ligi, Teele; Nehrenheim, Emma (2015). Characterization of algal and microbial community growth in a wastewater treating batch photo-bioreactor inoculated with lake water. Algal Research, 11, 421−427. DOI: 10.1016/j.algal.2015.02.005.
1.1.
2015
Kasak, Kuno; Mander, Ülo; Truu, Jaak; Truu, Marika; Järveoja, Järvi; Maddison, Martin; Teemusk, Alar (2015). Alternative filter material removes phosphorus and mitigates greenhouse gas emission in horizontal subsurface flow filters for wastewater treatment. Ecological Engineering, 77, 242−249. DOI: 10.1016/j.ecoleng.2015.01.038.
1.1.
2015
Mander, Ü.; Maddison, M.; Soosaar, K.; Koger, H.; Teemusk, A.; Truu, J.; Well, R.; Sebilo, M. (2015). The impact of a pulsing water table on wastewater purification and greenhouse gas emission in a horizontal subsurface flow constructed wetland. Ecological Engineering, 80, 69−78. DOI: 10.1016/j.ecoleng.2014.09.075.
1.1.
2015
Mander, Ülo; Maddison, Martin; Soosaar, Kaido; Teemusk, Alar; Kanal, Arno; Uri, Veiko;Truu, Jaak. (2015). The impact of a pulsing groundwater table on greenhouse gas emissions in riparian grey alder stands. Environmental Science and Pollution Research, 22 (4), 2360−2371. DOI: 10.1007/s11356-014-3427-1.
1.1.
2015
Ligi, Teele; Truu, Marika; Oopkaup, Kristjan; Nõlvak, Hiie; Mander, Ülo; William, J. Mitsch; Truu, Jaak (2015). The genetic potential of N2 emission via denitrification and ANAMMOX from the soils and sediments of a created riverine treatment wetland complex. Ecological Engineering, 80, 181−190. DOI: 10.1016/j.ecoleng.2014.09.072.
1.1.
2015
Chusova, O.; Nõlvak, H.; Odlare, M.; Truu, J.; Truu, M.; Oopkaup, K.; Nehrenheim, E. (2015). Biotransformation of pink water TNT on the surface of a low-cost adsorbent pine bark. Biodegradation, 26 (5), 375−386. DOI: 10.1007/s10532-015-9740-7.
1.1.
2015
Krustok, I.; Truu, J.; Odlare, M.; Truu, M.; Ligi, T.; Tiirik, K.; Nehrenheim, E. (2015). Effect of lake water on algal biomass and microbial community structure in municipal wastewater-based lab-scale photobioreactors. Applied Microbiology and Biotechnology, 99 (15), 6537−6549. DOI: 10.1007/s00253-015-6580-7.
1.2.
2015
Truu, Jaak; Truu, Marika; Espenberg, Mikk; Nõlvak, Hiie; Juhanson, Jaanis (2015). Phytoremediation And Plant-Assisted Bioremediation In Soil And Treatment Wetlands: A Review. The Open Biotechnology Journal, 9 (1), 1−15.
1.1.
2014
Mander, Ülo; Well, Rainer; Weymann, Daniel; Soosaar, Kaido; Maddison, Martin; Kanal, Arno; Lõhmus, Krista; Truu, Jaak; Augustin, Jürgen;Tournebize, Julien. (2014). Isotopologue Ratios of N2O and N2 Measurements Underpin the Importance of Denitrification in Differently N-Loaded Riparian Alder Forests. Environmental Science & Technology, 48 (20), 11910−11918. DOI: 10.1021/es501727h.
1.1.
2014
Chusova, O.; Nolvak, H.; Nehrenheim, E.; Truu, J.; Odlare, M.; Oopkaup, K.; Truu, M. (2014). Effect of pine bark on the biotransformation of trinitrotoluene and on the bacterial community structure in a batch experiment. Environmental Technology, 35 (19), 2456−2465. DOI: 10.1080/09593330.2014.909888.
1.1.
2014
Muter, O.; Berzins, A.; Strikauska, S., Pugajeva, I.; Bartkevics, V.; Dobele, G; Truu, J.; Truu, M.; Steiner, C. (2014). The effects of woodchip- and straw-derived biochars on the persistence of the herbicide 4-chloro-2-methylphenoxyacetic acid (MCPA) in soils. Ecotoxicology and Environmental Safety, 109, 93−100. DOI: 10.1016/j.ecoenv.2014.08.012.
1.1.
2014
Vengerfeldt, Veiko; Špilka, Katerina; Saag, Mare; Preem, Jens-Konrad; Oopkaup, Kristjan; Truu, Jaak; Mändar, Reet. (2014). Highly diverse microbiota in dental root canals in cases of apical periodontitis (data of Illumina sequencing). Journal of Endodontics, 40 (11), 1778−1783. DOI: 10.1016/j.joen.2014.06.017.
1.1.
2014
Leito, Aivar; Elts, Jaanus; Mägi, Eve; Truu, Jaak; Ivask, Mari; Kuu, Annely; Ööpik, Merle; Meriste, Mart; Ward, Raymond; Kuresoo, Andres; Pehlak, Hannes; Sepp, Kalev; Luigujõe, Leho (2014). Coastal grassland wader abundance in relation to breeding habitat characteristics in Matsalu Bay, Estonia. Ornis Fennica, 3, 149−165.
1.1.
2014
Mander, Ü.; Dotro, G.; Ebie, Y.; Towprayoon, S.; Chiemchaisri, C.; Nogueira, S.F.; Jamsranjav, B.; Kasak, K.; Truu, J.; Tournebize, J.; Mitsch, W.J. (2014). Greenhouse gas emission in constructed wetlands for wastewater treatment: a review. Ecological Engineering, 66, 19−35. DOI: 10.1016/j.ecoleng.2013.12.006.
1.1.
2014
Tiirik, Kertu; Nolvak, Hiie; Oopkaup, Kristjan; Truu, Marika; Preem, Jens-Konrad; Heinaru, Ain; Truu, Jaak (2014). Characterization of the bacterioplankton community and its antibiotic resistance genes in the Baltic Sea. Biotechnology and Applied Biochemistry, 61 (1), 23−32. DOI: 10.1002/bab.1144.
1.1.
2014
Ligi, T.; Oopkaup, K.; Truu, M.; Preem, J.-K.; Nõlvak, H.; Mitsch, W.J.; Mander, Ü.; Truu, J. (2014). Characterisation of bacterial communities in soil and sediment of a created riverine wetland complex using high-throughput 16S rRNA amplicon sequencing. Ecological Engineering, 72, 56−66. DOI: 10.1016/j.ecoleng.2013.09.007.
1.1.
2014
Ligi, T.; Truu, M.; Truu, J.; Nõlvak, H.; Kaasik, A.; Mitsch, W. J.; Mander, Ü. (2014). Effects of soil chemical characteristics and water regime on denitrification genes (nirS, nirK, and nosZ) abundances in a created riverine wetland complex. Ecological Engineering, 72, 47−55. DOI: 10.1016/j.ecoleng.2013.07.015.
3.2.
2014
Ligi, Teele; Truu, Marika; Oopkaup, Kristjan; Truu, Jaak (2014). Reostunud jõevett puhastava läbivooluliste tehismärgalade kompleksi pinnase bakterikoosluse struktuur ja lämmastiku ärastusega seotud protsesside geneetiline potentsiaal. Erki Tammiksaar, Taavi Pae, Ülo Mander (Toim.). Publicationes Instituti Geographici Universitatis Tartuensis (363−381). Tartu: Eesti Ülikoolide Kirjastus.
3.2.
2014
Kasak, Kuno; Truu, Marika; Truu, Jaak; Mander, Ülo (2014). Fosfori eemaldamine reoveest põlevkivituhasette abil horisontaalvoolulises pinnasfiltersüsteemis: mõju kasvuhoonegaaside emissioonile. Tammiksaar, Erki; Pae, Taavi; Mander, Ülo (Toim.). Publicationes Instituti Geographici Universitatis Tartuensis (330−341). . Tartu: Eesti Ülikoolide Kirjastus.
5.1.
2014
Tuppits, Ulrika; Orro, Toomas; Einarsson, Stig; Salumets, Andres; Truu, Jaak; Kavak, Ants (2014). The metagenomic analysis of the mares’ intrauterine fluid. Reproduction in Domestic Animals, 49: 18th Annual Conference of the European Society for Domestic Animal Reproduction (ESDAR), Helsinki,Finland, 11–13 September 2014. Ed. H. Rodriguez-Martinez. Blackwell Verlag Gmbh, 46−46. (s 3).
5.2.
2014
Kasemets, K.; Suppi, S.; Truu, J.; Kahru, A. (2014). Toxicity of silver nanoparticles to the microbial community of municipal wastewater treatment system. Book of Abstracts: 2nd Congress of Baltic Microbiologist, Tartu, Estonia, 16.10-19.10.2014.
5.2.
2014
Runnel, Riina; Saag, Mare; Olak, Jana; Honkala, Eino; Honkala, Sisko; Mäkinen, Kauko; Truu, Jaak; Štšepetova, Jelena; Mändar, Reet. (2014). Changes in Oral Microbiota After Long-term Daily Sugar Alcohols Using. IADR/PER Congress 10-13 September Dubrovnik, Croatia.
5.2.
2014
Mändar, R; Vengerfeldt, V; Špilka, K; Saag, M; Nõlvak, H; Preem, J; Oopkaup, K; Truu, J. (2014). Highly diverse root canal microbiota in chronic apical periodontitis according to Illumina sequencing. Anaerobe 2014, Chicago, June 28–July 1, 2014..
5.2.
2014
Mändar, R; Vengerfeldt, V; Špilka, K.; Saag, M; Nõlvak, H; Preem, J.-.K; Oopkaup, K.; Truu, J. (2014). Dental root canal microbiota in chronic apical periodontitis patients (data from Illumina sequencing). 24th ECCMID, Barcelona, May 10-13, 2014.. , eP499.
5.2.
2014
Mander, Ü; Ligi, T; Truu, M; Truu, J; Pärn, J; Egorov, S; Järveoja, J; Vohla, C; Maddison, M; Soosaar, K; Oopkaup, K; Teemusk, A; Preem, J-K; Uuemaa, E. (2014). Spatial patterns of denitrification and its functional genes in peatlands. Geophysical Research Abstracts, 16: EGU General Assembly 2014. Vienna: European Geosciences Union. (EGU2014-5482).
1.1.
2013
Viggor, Signe; Juhanson, Jaanis; Jõesaar, Merike; Mitt, Mario; Truu, Jaak; Vedler, Eve; Heinaru, Ain (2013). Dynamic changes in the structure of microbial communities in Baltic Sea coastal seawater microcosms modified by crude oil, shale oil or diesel fuel. Microbiological Research, 168 (7), 415−427. DOI: 10.1016/j.micres.2013.02.006.
1.1.
2013
Marja, Riho; Uuemaa, Evelyn; Mander, Ülo; Elts, Jaanus; Truu, Jaak (2013). Landscape pattern and census area as determinants of the diversity of farmland avifauna in Estonia. Regional Environmental Change, 13 (5), 1013−1020. DOI: 10.1007/s10113-013-0409-7.
1.1.
2013
Zhou, Y.; Tigane, T.; Li, X.; Truu, M.; Truu, J.; Mander, Ü. (2013). Hexachlorobenzene dechlorination in constructed wetland mesocosms. Water Research, 47 (1), 102−110. DOI: 10.1016/j.watres.2012.09.030.
1.1.
2013
Nõlvak, H.; Truu, J.; Limane, B.; Truu, M.; Cepurnieks, G.; Bartkevics, V.; Juhanson, J.; Muter, O. (2013). Microbial community changes in TNT spiked soil bioremediation trial using biostimulation, phytoremediation and bioaugmentation. Journal of Environmental Engineering and Landscape Management, 21 (3), 153−162. DOI: 10.3846/16486897.2012.721784.
1.1.
2013
Nõlvak, Hiie; Truu, Marika; Tiirik, Kertu; Oopkaup, Kristjan; Sildvee, Teele; Kaasik, Ants; Mander, Ülo; Truu, Jaak (2013). Dynamics of antibiotic resistance genes and their relationships with system treatment efficiency in a horizontal subsurface flow constructed wetland. The Science of The Total Environment, 461, 636−644. DOI: 10.1016/j.scitotenv.2013.05.052.
5.2.
2013
Truu, Jaak; Truu, Marika; Oopkaup, Kristjan; Preem, Jens-Konrad; Mander, Ülo (2013). Bacterial community composition and succession in subsurface flow constructed wetland assessed by Illumina sequencing. 2nd International Conference on Water Research; Singapur; 20-23.01.213.
5.2.
2013
Mändar, R.; Vengerfeldt, V.; Špilka, K.; Saag, M.; Nõlvak, H.; Preem, J.; Oopkaup, K.; Truu, J. (2013). Microbiota of dental root canal in case of chronic apical periodontitis (data of Illumina sequencing). 3rd ASMET - The ASM Emerging Technologies Conference; Izmir, Turkey; June 25-28, 2013.
5.2.
2013
Mändar, Reet; Borovkova, Natalja; Lapp, Eleri; Korrovits, Paul; Punab, Margus; Metspalu, Andres; Krjutškov, Kaarel; Nõlvak, Hiie; Preem, Jens; Oopkaup, Kristjan; Salumets, Andres; Truu, Jaak (2013). Seminal microbiome in male partners of infertile couples. Microbiome and Host Health; Lisbon, Portugal; May 12-14, 2013.
5.2.
2013
Mändar, Reet; Borovkova, Natalja; Lapp, Eleri; Korrovits, Paul; Punab, Margus; Metspalu, Andres; Krjutškov, Kaarel; Nõlvak, Hiie; Preem, Jens; Oopkaup, Kristjan; Salumets, Andres; Truu, Jaak. (2013). Genital tract microbiome in infertile couples. 36 th International Congress of the Society for Microbial Ecology and Disease; September 24-26, 2013, Kosice, Slovakia.
5.2.
2013
Kasemets, K; Suppi, S; Kahru, A; Nõlvak, H; Truu, M; Truu, J. (2013). Impact of silver nanoparticles on the microbial community of municipal wastewater trreatment system. 23rd SETAC Europe Annual Meeting, 12-16 May 2013, Glasgow.
1.1.
2012
Kõrs, Aive; Vilbaste, Sirje; Käiro, Kairi; Pall, Peeter; Piirsoo, Kai; Truu, Jaak; Viik, Malle (2012). Temporal changes in the composition of macrophyte communities and environmental factors governing the distribution of aquatic plants in an unregulated lowland stream, the River Emajõgi (Estonia). Boreal Environment Research, 17 (6), 460−472.
1.1.
2012
Preem, J.-K.; Truu, J.; Truu, M.; Mander, Ü.; Oopkaup, K.; Lõhmus, K.; Helmisaari, H.-S.; Uri, V.; Zobel, M. (2012). Bacterial community structure and its relationship to soil physico-chemical characteristics in alder stands with different management histories. Ecological Engineering, 49, 10−17. DOI: 10.1016/j.ecoleng.2012.08.034.
1.1.
2012
Nõlvak, H.; Truu, M.; Truu, J. (2012). Evaluation of quantitative real-time PCR workflow modifications on 16S rRNA and tetA gene quantification in environmental samples. The Science of The Total Environment, 426, 351−358. DOI: 10.1016/j.scitotenv.2012.03.054.
1.1.
2012
Salm, Jüri-Ott; Maddison, Martin; Tammik, Sille; Soosaar, Kaido; Truu, Jaak; Mander, Ülo (2012). Emissions of CO2, CH4 and N2O from undisturbed, drained and mined peatlands in Estonia. Hydrobiologia, 692 (1), 41−55. DOI: 10.1007/s10750-011-0934-7.
1.1.
2012
Zhou, Y.; Trestip, S.; Li, X.; Truu, M.; Truu, J.; Mander, Ü. (2012). Dechlorination of hexachlorobenzene in treatment microcosm wetlands. Ecological Engineering, 42, 249−255. DOI: 10.1016/j.ecoleng.2012.02.017.
1.1.
2012
Nõlvak, H.; Sildvee, T.; Kriipsalu, M.;Truu, J (2012). Application of microbial community profiling and functional gene detection for assessment of natural attenuation of petroleum hydrocarbons in boreal subsurface. Boreal Environment Research, 17, 113−127.
5.2.
2012
Mändar, R.; Truu, J.; Borovkova, N.; Punab, M. (2012). Effect of Sexual Intercourse on Vaginal Microbiome of Infertile Couples’ Women (data of Illumina sequencing). 52nd ICAAC: Interscience Conference on Antimicrobial Agents and Chemotherapy: 52nd ICAAC (Interscience Conference on Antimicrobial Agents and Chemotherapy), Sept. 9.-12, 2012, San Francisco (USA)..
5.2.
2012
Truu, Jaak; Mändar, Reet; Borovkova, Natalja; Lapp, Eleri; Korrovits, Paul; Punab, Margus; Metspalu, Andres; Krjutškov, Kaarel; Nõlvak, Hiie; Preem, Jens; Oopkaup, Kristjan; Salumets, A. (2012). Vaginal microbiome before and after intercourse by Illumina sequencing. 22nd EBCOG (European Congress of Obstetrics and Gynaecology) 2012, Tallinn, 9.-12.05.2012..
5.2.
2012
Truu, J.; Borovkova, N.; Lapp, E.; Korrovits, P.; Punab, M.; Metspalu, A.; Krjutškov, K.; Nõlvak, H.; Preem, J.; Oopkaup, K.; Salumets, A.; Mändar, R. (2012). Effect of sexual intercourse on vaginal microbiome of infertile couples’ women. International Human Microbiome Congress: International Human Microbiome Congress organized by MetaHIT, Paris (France) March 19-21, 2012..
5.2.
2012
Kasemets, K.; Kahru, A.; Truu, M; Truu, J. (2012). Emerging environmental contaminants in wastewater effluents – pharmaceutical’s residues and engineered nanoparticles: effect on the wastewater treatment and antibiotic resistance gene transfer in the environment. Finnish Society of Toxicology 33rd Annual Symposium, Finland, University of Jyväskylä, 16-17.04.2012. , 13.
1.1.
2011
Rosenvald, K.; Ostonen, I.; Truu, M.; Truu, J.; Uri, V.; Vares, A.; Lõhmus, K. (2011). Fine-root rhizosphere and morphological adaptations to site conditions in interaction with tree mineral nutrition in young silver birch (Betula pendula Roth.) stands. European Journal of Forest Research, 130 (6), 1055−1066. DOI: 10.1007/s10342-011-0492-6.
1.1.
2011
Soosaar, K.; Mander, Ü.; Maddison, M.; Kanal, A.; Kull, A.; Lõhmus, K.; Truu, J.; Augustin, J. (2011). Dynamics of gaseous nitrogen and carbon fluxes in riparian alder forests. Ecological Engineering, 37 (1), 40−53.
1.1.
2011
Rosenvald, Katrin; Kuznetsova, Tatjana; Ostonen, Ivika; Truu, Marika; Truu, Jaak; Uri, Veiko; Lõhmus, Krista (2011). Rhizosphere effect and fine-root morphological adaptations in a chronosequence of silver birch stands on reclaimed oil shale post-mining areas. Ecological Engineering, 37 (7), 1027−1034. DOI: 10.1016/j.ecoleng.2010.05.011.
1.2.
2011
Sepp, Mait; Palm, Vello; Leito, Aivar; Päädam, Kalev; Truu, Jaak (2011). Effect of atmospheric circulation types on spring arrival of migratory birds and long-term trends in the first arrival dates in Estonia. Estonian Journal of Ecology, 60 (2), 111−131. DOI: 10.3176/eco.2011.2.03.
1.2.
2011
Sepp, M.; Palm, V.; Leito, A.; Päädam, K.; Truu, J. (2011). The effect of atmospheric circulation types and long-term trends on spring arrival of migratory birds in Estonia. Estonian Journal of Ecology, xx−xx.
3.4.
2011
Limane, B.; Muter, O.; Juhanson, J.; Truu, M.; Truu, J.; Nõlvak, H. (2011). Characterization of microbial community structure after application of different bioremediation approaches in TNT contaminated soil. Environmental Engineering 8th International Conference, 19-20 May 2011, Vilnius, Lithuania. , 188−194.
1.1.
2010
Abarenkov, K; Tedersoo, L; Nilsson, RH; Vellak, K; Saar, I; Veldre, V; Parmasto, E; Prous, M; Aan, A; Ots, M; Kurina, O; Ostonen, I; Jõgeva, J; Halapuu, S; Põldmaa, K; Toots, M; Truu, J; Larsson, K-H; Kõljalg, U (2010). PlutoF – a web based workbench for ecological and taxonomic research, with an online implementation for fungal ITS sequences. Evolutionary Bioinformatics, 189−196. DOI: 10.4137/EBO.S6271.
3.2.
2010
Lõhmus, K.; Truu, J.; Truu, M.; Kaar, E.; Ostonen, I.; Meel, S.;Kuznetsova, T.; Rosenvald, K.; Vares, A.; Kurvits, V.; Kanal, A.; Uri, V. (2010). Risosfääriprotsesside mõju metsaökosüsteemi kujunemisele erineva liigilise koosseisuga puistutes põlevkivikarjääride puistangutel. Kaar, E; Kiviste, K. (Toim.). Maavarade kaevandamine ja puistangute rekultiveerimine Eestis (185−194). . Tartu: Eesti Maaülikool.
5.2.
2010
Nõlvak, H.; Sildvee, T.; Kriipsalu, M.; Truu, J. (2010). Assessment of potential of monitored natural attenuation (MNA) in oil-polluted subsurface. Linnaeus ECO-TECH´10: Linnaeus ECO-TECH´10, 22-24 November 2010 in Kalmar, Sweden.
5.2.
2010
Truu, Jaak; Preem, Jens-Konrad; Truu, Marika; Lõhmus, Krista; Mander, Ülo (2010). Assessment of bacterial community structure in soils from alder stands using pyrosequencing. Soil Metagenomics 2010: Soil Metagenomics 2010: Implications of next-generation DNA sequencing on microbial diversity research and soil ecology; Braunschweig, Germany; 8-10.12.2010. , 67−68.
5.2.
2010
Truu, J.; Viggor, S.; Jõesaar, M.; Heinaru, A. (2010). Isolation of alkane degrading bacterial strains from Baltic Sea coastal area. Proceedings of XXIX ECCO Meeting: XXIX ECCO Meeting, Istanbul (Turkey), 1-2 July 2010. , 41.
5.2.
2010
Krustok, I.; Truu, J. (2010). Fosfaati lahustavate bakterite isoleerimine tehnogeensest pinnasest. Talveakadeemia 2010 üliõpilaste teadusartiklite konkursi kogumik: Talveakadeemia 2010, Viinistu konverentsi- ja kultuurikeskus, 26.-28.02.2010. Toim. Toonpere, P., 25−29.
1.1.
2009
Palm, Vello; Leito, Aivar; Truu, Jaak; Tomingas, Oliver (2009). http://www.ornisfennica.org/pdf/vol86-3/2Bakaloudis.pdf. Ornis Fennica, 86 (3), 97−108.
1.1.
2009
Nurk, K.; Zaytsev, I.; Talpsep, I.; Truu, J.; Mander, Ü. (2009). Bioaugmentation in a newly established LECA-based horizontal flow soil filter reduces the adaptation period and enhances denitrification. Bioresource Technology, 100 (24), 6284−6289. DOI: 10.1016/j.biortech.2009.07.023.
1.1.
2009
Truu, M.; Juhanson, J., Truu, J. (2009). Microbial biomass, activity and community composition in constructed wetlands. The Science of The Total Environment, 407 (13), 3958−3971. DOI: 10.1016/j.scitotenv.2008.11.036.
1.1.
2009
Truu, M.; Truu, J.; Heinsoo, K. (2009). Changes in soil microbial community under willow coppice: the effect of irrigation with secondary-treated municipal wastewater. Ecological Engineering, 35 (6), 1011−1020. DOI: 10.1016/j.ecoleng.2008.08.010.
1.1.
2009
Juhanson, J; Truu, J; Heinaru, E; Heinaru, A. (2009). Survival and catabolic performance of introduced Pseudomonas strains during phytoremediation and bioaugmentation field experiment. FEMS Microbiology Ecology, 70 (3), 446−455. DOI: 10.1111/j.1574-6941.2009.00754.x.
3.1.
2009
Limane, B.; Juhanson, J.; Truu, J., Truu, M.; Muter, O.; Versilovskis, A.; Dubova, L.; Zarina, Dz. (2009). Changes in microbial population affected by physico-chemical conditions of soils contaminated by explosives. Current Research Topics in Applied Microbiology and Microbial Biotechnology: II International Conference on Environmental, Industrial and Applied Microbiology (BioMicroWorld2007); Sevilla; 28.11-1.12.2007. Ed. Mendez-Vilas, A. World Scientific Publ Co Pte Ltd, 637−640.
5.2.
2009
Viggor, S.; Truu, J.; Mitt, M.; Merimaa, M.; Heinaru, A. (2009). Alkane degradation potential of Baltic Sea coastal planktonic bacteria. BAGECO 10, Programm & Abstract: BAGECO 10, Bacterial genetics and ecology- coexisting on a changing planet; Uppsala, Rootsi; 15-19.06.2009. Uppsala, Rootsi, P268−P268.
5.2.
2009
Rosenvald, Katrin; Truu, Marika; Kuznetsova, Tatjana; Ostonen, Ivika; Truu, Jaak; Uri, Veiko; Lõhmus, Krista (2009). Rhizosphere, fine-root, and soil parameters in a silver birch stand chronosequence on reclaimed oil shale mining area. Conference Programme & Abstracts: 6th International Symposium on Ecosystem Behaviour BIOGEOMON 2009; University of Helsinki, Finland; June 29 - July 3 2009. Ed. Ukonmaanaho, Liisa; Nieminen, Tiina M.; Starr, Mike. Helsinki: Finnish Forest Research Institute, 426−426. (Working Papers of the Finnish Forest Research Institute; 128).
5.2.
2009
Nõlvak, H.; Truu, J.; Kriipsalu, M. (2009). Assessment of monitored natural attenuation potential in oil-polluted subsurface. FEMS 3rd Congress of European Microbiologists: Microbes and Man - interdependence and future challenges: FEMS 3rd Congress of European Microbiologists: Microbes and Man - interdependence and future challenges.
5.2.
2009
Truu, J.; Viggor, S.; Mitt, M.; Merimaa, M.; Heinaru, A. (2009). Diversity of alkane degradating planktonic bacterial community in Baltic sea coastal area. FEMS 2009 Microbes and Man-interdependence and future challenges, Abstracts: FEMS 2009 3rd Congress of European Microbiologists; Gothenburg Sweden; June 28-July 2, 2009. Gothenburg, Sweden.
5.2.
2009
Truu, J.; Juhanson, J.; Heinaru, E.; Heinaru, A. (2009). Survival and catabolic performance of introduced bacterial strains during phytoremediation field experiment. COST Action 859 Phyto 2009 The Final International Conference on Phytotechnologies to promote sustainable land use and improve food safety: COST Action 859 Phyto 2009 The Final International Conference on Phytotechnologies to promote sustainable land use and improve food safety, Ascona, Switzerland, 11-16 October 2009. , 191.
5.2.
2009
Truu, M.; Truu, J. (2009). IMPACT OF LAND USE ON MICROBIAL COMMUNITIES IN ESTONIAN SOILS. 3rd Congress of European Microbiologists, Göteborg, Rootsi, 28.06-02.07.2009.
5.2.
2009
Truu, M.; Truu, J.; Juhanson, J.; Kutti, S. (2009). Microbial community biomass and structure in phosphorous removal filters based on oil shale ash. 3rd Wetland Pollutant Dynamics and Control - WETPOL2009: 3rd Wetland Pollutant Dynamics and Control - WETPOL2009. Ed. Josep M. Bayona, Joan García. Barcelona, 438−439.
5.2.
2009
Truu, Jaak; Preem, Jens-Konrad (2009). Trinucleotide simple sequence repeats in Pseudomonas fluorescens genome and possibilites to use them for subtyping of Pseudomonas species. ECCO COLLECTIONS: CELLULAR AND GENETIC DIVERSITY AND MICROBIAL COMMONS FOR THE RESEARCH COMMUNITY: European Culture Collections’ Organization (ECCO) XXVIII Annual Meeting, Gothenburg, Sweden; 2-3 July 2009. , x−x.
5.2.
2009
Nõlvak, H.; Truu, J. (2009). Assessment of potential of monitored natural attenuation (MNA) in oil-polluted subsurface. CREAM and RECETO Symposium: Microbial Degradation of Soil Pollutants – Processes and Impact: CREAM and RECETO Symposium: Microbial Degradation of Soil Pollutants – Processes and Impact; Kopenhaagen, Taani; 3-4.11.2009. , 24−24.
1.1.
2008
Palo, A.; Linder, M.; Truu, J.; Mander, Ü. (2008). The influence of biophysical factors and former land use on forest floristic variability on Saaremaa and Muhu islands, Estonia. Journal for nature conservation, 16, 123−134. DOI: 10.1016/j.jnc.2008.08.001.
1.1.
2008
Ivask, M.; Kuu, A.; Meriste, M.; Truu, J.; Truu, M.; Vaater, V. (2008). Invertebrate communities (Annelida and epigeic fauna) in three types of Estonian cultivated soils. European Journal of Soil Biology, 44, 532−540.
1.1.
2008
Truu, M.; Truu, J.; Ivask, M. (2008). Soil microbiological and biochemical properties for assessing the effect of agricultural management practices in Estonian cultivated soils. European Journal of Soil Biology, 44 (2), 231−237. DOI: 10.1016/j.ejsobi.2007.12.003.
1.1.
2008
Leito, Aivar; Truu, Jaak; Õunsaar, Maris; Sepp, Kalev; Kaasik, Are; Ojaste, Ivar; Mägi, Eve (2008). The impact of agriculture on autumn staging Eurasian Cranes (Grus grus) in Estonia. Agricultural and Food Science, 17 (1), 53−62.
1.2.
2008
Leito, Aivar; Truu, Jaak (2008). Development of the Barnacle Goose Branta leucopsis population in Estonia. Vogelwelt, 129, 239−243.
1.3.
2008
Leito, Aivar; Truu, Jaak; Põder, Indrek (2008). Hanikatsi laiu laialehise salumetsa haudelinnustiku võrdlus teiste sarnaste metsade haudelinnustikega Eestis. Hirundo : Eesti Ornitoloogiaühingu ajakiri, 21, 2, 73−86.
3.2.
2008
Truu, J. (2008). Mikrobioloogilised kollektsioonid Eestis. Parmasto, E.; Viikberg, J. (Toim.). Eesti humanitaar- ja loodusteaduslikud kogud. Seisund, kasutamine, andmebaasid (215−221). . Tartu: Tartu Ülikooli Kirjastus.
3.2.
2008
Nurk, K.; Zaytsev, I.; Talpsep, I.; Truu, J.; Mander, Ü. (2008). Bioaugmentation in a newly established LWA-based horizontal flow soil filter reduces the adaptation period and enhances denitrification. proc.:11th international Conference on Wetland systems technology in Water Pollution Control, Nov. 1-7, 2008, 1: 11th international Conference on Wetland systems technology in Water Pollution Control, Nov. 1-7, 2008. Ed. Billore S., Dass P., Vymazal J., 392−399.
3.4.
2008
Truu, M.; Truu, J.; Juhanson, J. (2008). Overview of microbial biomass, activity and community composition in constructed wetlands. Publicationes Instituti Geographici Universitatis Tartuensis, 106: 3rd Annual Meeting of the European Chapter of the Society of Wetland Scientists. Ed. Mander, Ü. Tartu: Tartu University Press, 81−82.
3.4.
2008
Truu, J.; Truu, M.; Juhanson, J.; Kutti, S. (2008). Microbial community in phosphorius removal filters based on oil shale ash. Publicationes Instituti Geographici Universitatis Tartuensis, 106: 3rd Annual Meeting of the European Chapter of the Society of Wetland Scientists; Kuressaare; 29.06-3.07.2008. Ed. Mander, Ü. Tartu: Tartu University Press, 83−84.
5.1.
2008
Kriipsalu, M.; Oinberg, A.; Uri, U.; Truu, J.; Vill-Sulp, K. (2008). Closing of small dumpsites in Estonia- Focus on leachate, gas, and aftercare. 7th International Conference on Environmental Engineering, 1-3: 7th International Conference on Environmental Engineering, Vilnius, May 22-23, 2008. Ed. Cygas, D.; Froehner, KD. Vilnius: Vilnius Gediminas Technical University Press "Technika", 583−588.
5.2.
2008
Truu, M.; Truu, J.; Kriipsalu, M.; Nõlvak, H. (2008). Passive remediation approach for treatment of oil-polluted subsurface: a case study at former oil waste dump site. World Congress of Industrial Biotechnology, Hangzhou , Hiina, 18-23. mai 2008.
5.2.
2008
Truu, J.; Heinaru, E.; Heinaru, A.; Juhanson, J. (2008). Bioaugmentation efficiency in phytoremediation field experiment. World Congress of Industrial Biotechnology, Hangzhou , Hiina, 18-23. mai 2008.
5.2.
2008
Nõlvak, H.; Truu, J. (2008). Assessment of potential of monitored natural attenuation in oil polluted subsurface using molecular methods. International Life Sciences Students's Conference Book of abstracts: International Life Sciences Students's Conference; Warsaw, Poland; 10-14 September 2008. , 52.
5.2.
2008
Juhanson, J.; Truu, J.; Heinaru, E.; Heinaru, A. (2008). Feasibility of bioaugmentation during phytoremediation field experiment. Phytotechnologies in practice - biomass production, agricultural methods, legacy, legal and economomic aspects: Meeting of Working Group 4 "Integration and apllication of phytotechnologies" COST Action 859; Verneuil-en-Halatte, France; October 14-17, 2008. , 43.
5.2.
2008
Nõlvak, H.; Truu, J.; Kriipsalu, M. (2008). Asssessment of passive remediation approach for treatment of oil-polluted subsurface. The International Youth Science Environmental Forum of Baltic Region Countries "Ecobaltica 2008" Book of Proceedings: The International Youth Science Environmental Forum of Baltic Region Countries "Ecobaltica 2008"; St.-Peterburg, Russia; June 26-28, 2008. Ed. Fiodorov, M.P.; Hogland, W.; Rud, V.Yu. St. Peterburg: St.Petersburg State Polytechnic University Publishing House, 207.
5.2.
2008
Truu, J.; Vedler, E. (2008). Microbial culture collections in Estonia. Proceedings of the 27th Annual General Meeting of the European Culture Collections Organization: 27th Annual General Meeting of the European Culture Collections Organization, Ghent, Belgium, 10-11 June 2008. Ghent.
1.1.
2007
Juhanson, J.; Truu, J.; Heinaru, E.; Heinaru, A. (2007). Temporal dynamics of microbial community in soil during phytoremediation field experiment. Journal of Environmental Engineering and Landscape Management, 15 (4), 213−220.
1.1.
2007
Ostonen, Ivika; Lõhmus, Krista; Helmisaari, Heljä-Sisko; Truu, Jaak; Meel, Signe (2007). Fine root morphological adaptations in Scots pine, Norway spruce and silver birch along a latitudinal gradient in boreal forests. Tree Physiology, 27 (11), 1627−1634.
1.1.
2007
Piirsoo, Kai; Vilbaste, Sirje; Truu, Jaak; Pall, Peeter; Trei, Tiiu; Tuvikene, Arvo; Viik, Malle (2007). Origin of phytoplankton and the environmental factors governing the structure of microalgal communities in lowand streams. Aquatic Ecology, 41 (2), 183−194.
1.1.
2007
Ivask, M.; Truu, J.; Kuu, A.; Truu, M.; Leito, A. (2007). Earthworm communities of flooded grasslands in Matsalu, Estonia. European Journal of Soil Biology, 43 (2), 71−76. DOI: 10.1016/j.ejsobi.2006.09.009.
1.2.
2007
Vilbaste, S.; Truu, J.; Leisk, Ü.; Iital, A. (2007). Species composition and diatom indices in relation to environmental parameters in Estonian streams. Archiv für Hydrobiologie - Supplement, 161, 307−326.
1.2.
2007
Ziembińska, A.; Raszka, A.; Truu, J.; Surmacz-Górska, J.; Miksch, K. (2007). Molecular analysis of temporal changes of a bacterial community structure in activated sludge using denaturing gradient gel electrophoresis (DGGE) and fluorescent in situ hybridization (FISH). Polish Journal of Microbiology, 56 (2), 119−127.
3.1.
2007
Truu, J.; Heinaru, E.; Vedler, E.; Juhanson, J.; Viirmäe, M.; Heinaru, A. (2007). Formation of microbial conmunities in oil shale chemical industry solid wastes during and bioaugmentation. In: Heipieper, H.J. (Ed.). Bioremediation of Soils Contaminated with Aromatic Compounds (57−66). . Springer. (NATO Science Series; 76).
3.1.
2007
Lõhmus, K.; Kull, A.; Truu, J.; Truu, M.; Kaar, E.; Ostonen, I.; Meel, S.; Kuznetsova, T.; Rosenvald, K.; Uri, V.; Kurvits, V.; Mander, Ü. (2007). The reclamation of the North Estonian oil shale mining area. In: Mander, Ü.; Wiggering, H.; Helming, K. (Ed.). Multifunctional land use: Meeting future demands for landscape goods and services (387−401). . Berlin Heidelberg: Springer.
3.4.
2007
Kängsepp, P.; Truu, J.; Juhanson, J. (2007). The investigation of microbial community structure along a leachate treatment system based on filter-bed technology. Publicationes Instituti Geographici Universitatis Tartuensis, 104: 2nd International Symposium on Wetland Pollutnat Dynamics and Control WETPOL 2007; Tartu, 16-20.09.2007. Ed. Mander, Ülo; Kõiv, Margit; Vohla, Christina. Tartu: Tartu Ülikooli Kirjastus, 144−146.
3.4.
2007
Truu, M.; Truu, J.; Heinsoo, K. (2007). Soil microbial community response to the irrigation of secondary-treated municipal wastewater under a willow coppice. Publicationes Instituti Geographici Universitatis Tartuensis, 104: 2nd International Symposium on Wetland Pollutant Dynamics and Control WETPOL 2007,16-20.09.2007. Ed. Mander, Ülo; Kõiv, Margit; Vohla, Christina. Tartu: Tartu Ülikooli Kirjastus, 545−546.
3.4.
2007
Kriipsalu, M., Truu, J., Juhanson, J. (2007). An integrated approach for restoration of a leachate pond by using vegetation on supportive structures. Proceedings: 1st World Aqua Congress, 28-30 November 2007, New Delhi, India. Ed. Dr Prabhas Sinha, Sanjay Rana., 124−129.
5.2.
2007
Vedler, E.; Truu, J. (2007). Use of alignment independent and alignment-dependent methods for comparison of bacterial isolates from soil samples. Proceedings of the 26th Annual General Meeting of the European Culture Collections' Organisation: ECCO XXVI 'Reconciling scientific and regulatory demands'; Goslar, Saksamaa; 11-12.10.2007. , 61−61.
5.2.
2007
Vedler, E.; Truu, J. (2007). Use of alignment independent and alignment-dependent methods for comparison of bacterial isolates from soil samples. The 11th International Conference on Culture Collections; Goslar, Germany; 7-11.10.2007. , 267.
5.2.
2007
Truu, J.; Truu, M.; Juhanson, J.; Nõlvak, H.; Kriipsalu, M. (2007). Assessment of passive remediation approach for treatment of oil-polluted subsurface. II International Conference on Environmental, Industrial and Applied Microbilogy (BioMicroWorld 2007); Seville, Spain; 28 November - 1 December, 2007. , 591.
5.2.
2007
Heinaru, A.; Truu, J.; Juhanson, J.; Vedler, E.; Heinaru, E. (2007). In situ and on site bioremediation of polluted areas: bioaugmentation with genetically characterised bacteria. Proceedings of the Latvian Academy of Sciences. SectionB, Vol 61. Latvia, 168. (No 5).
5.2.
2007
Nurk, K.; Truu, J.; Zaytsev, I.; Põldvere, A.; Noorvee, E.; Karabelnik, K.; Madisson, M.; Nikopensius, K.; Mander, Ü. (2007). Nutrient accumulation and microbial parameters in LWA-based hybrid constructed wetlands. Publicationes Instituti Geographici Universitatis Tartuensis, 104: 2nd International Symposium on Wetland Pollutnat Dynamics and Control WETPOL 2007; Tartu; 16-20.09.2007. Ed. Mander, Ü.; Kõiv, M.; Vohla, C. Tartu: Tartu Ülikooli Kirjastus, 234−235.
5.2.
2007
Truu, J.; Kriipsalu, M.; Juhanson, J. (2007). The impact of plant growth on microbial community and water chemistry in free-water constructed wetlands. Publicationes Instituti Geographici Universitatis Tartuensis, 104: 2nd International Symposium on Wetland Pollutnat Dynamics and Control WETPOL 2007; Tartu, 16-20.09.2007. Ed. Mander, Ülo; Kõiv, Margit; Vohla, Christina. Tartu: Tartu Ülikooli Kirjastus, 543−544.
6.3.
2007
Nõlvak, H.; Truu, J.; Kriipsalu, M.; Kurnasov, A. (2007). Seiratava loodusliku tervenemise rakendamine saneerimismeetodina. Keskkonnatehnika, 7, 17−19.
1.1.
2006
Leito, A.; Truu, J.; Roosaluste, E.; Sepp, K.; Põder, I. (2006). Long-term dynamics of breeding birds in broad-leaved deciduous forest on Hanikatsi Island tn the West-Estonian archipelago. Ornis Fennica, 83 (3), 124−130.
1.1.
2006
Lõhmus, K.; Truu, J.; Truu, M.; Kaar, E.; Ostonen, I.; Alama, S.; Kuznetsova, T.; Rosenvald, K.; Vares, A.; Uri, V.; Mander, Ü. (2006). Black alder as a perspective deciduous species for reclaiming of oil shale mining areas. In: Brebba, C. A.; Mander, Ü. (Ed.). Brownfields III. Prevention, Assessment, Rehabilitation and Development of Brownfield Sites (87−97). . Southampton, Boston: Wessex Institute of Techonology Press. (WIT Transactions on Ecology and the Environment; 94). DOI: 10.2495/BF060091.
1.1.
2006
Ostonen, I.; Lõhmus, K.; Alama, S.; Truu, J.; Kaar, E.; Vares, A.; Uri, V.; Kurvits, V. (2006). Morphological adaptations of fine roots in scots pine (Pinus sylvestris L.), silver birch (Betula pendula roth.) and black alder (Alnus glutinosa (L.) Gaertn.) stands in recultivated areas of oil shale mining and semicoke hills. Oil Shale, 23 (2), 187−202.
1.1.
2006
Lõhmus, K.; Truu, M.; Truu, J.; Ostonen, I.; Kaar, E.; Vares, A.; Uri, V.; Alama, S.; Kanal, A. (2006). Functional diversity of culturable bacterial communities in the rhizosphere in relation to fine-root and soil parameters in alder stands on forest, abandoned agricultural, and oil-shale areas. Plant and Soil, 283, 1−10.
1.2.
2006
Ivask, M.; Kuu, A.; Truu, M.; Truu, J. (2006). The effect of soil type and soil moisture on earthworm communities = Mullatüübi ja niiskusetingimuste mõju põllumuldade vihmaussikooslustele. Agraarteadus, XVII (1), 3−11.
2.2.
2006
Leito, A.; Keskpaik, J.; Ojaste, I.; Truu, J. (2006). The Eurasian Crane in Estonia. Tartu: Eesti Loodusfoto.
2.2.
2006
Leito, Aivar; Keskpaik, Jri; Ojaste, Ivar; Truu, Jaak; Ader, Arne; Leito, Tiit; Peterson, Kaja; Nowald, Gnter; Veide, Aivar (2006). The Eurasian crane in Estonia. Tartu: Eesti Loodusfoto.
3.4.
2006
Nurk, K.; Teiter, S.; Lõhmus, K.; Truu, J.; Mander, Ü. (2006). The influence of site conditions on microbial indicators andgreenhouse gas emissions from a riparian buffer zone and a horizontal subsurface flow constructed wetland. Proc: 10th International Conference on Wetland systems technology in Water Pollution Control, Sept. 23-29, 2006: 10th International Conference on Wetland systems technology in Water Pollution Control, Sept. 23-29, 2006. Ed. Diaz V., Vymazal J., 965−975.
3.5.
2006
"Truu, Marika;Truu, Jaak;Ivask, Mari" (2006). Mikrobioloogiliste näitajate kasutamine agrotehniliste võtete mõju hindamisel Eesti põllumuldades. Kaasaegse ökoloogia probleemid: loodushoiu majandushoovad : Eesti X Ökoloogiakonverentsi lühiartiklid : Tartu, 27.-28. aprill, 2006. Tartu : Eesti Ökoloogiakogu, 200−204.
3.5.
2006
Ivask, M.; Koorberg, P.; Kuu, A.; Truu, J. (2006). Vihmaussikoosluste parameetrite kasutamine indikaatorina põllumajandusliku keskkonnatoetuse hindamisel. Kaasaegse ökoloogia probleemid : loodushoiu majandushoovad : Eesti X Ökoloogiakonverentsi lühiartiklid : Tartu, 27.-28. aprill, 2006: Eesti X Ökoloogiakonverents; Tartu; 27-28 Aprill, 2006. Tartu : Eesti Ökoloogiakogu: Teadusühing IM SAARE, 51−56.
5.2.
2006
Truu, J.; Juhanson, J.; Heinaru, E.; Vedler, E.; Merimaa, M.; Heinaru, A. (2006). Monitoring changes in microbial community structure in oil shale chemical industry solid waste during phytoremediation and bioaugmentation. International Symposium on Environmental Biotechnology; Leipzig, Germany; 9-14 July, 2006. , 411.
5.2.
2006
Truu, J.; Heinaru, E.; Heinaru, A. (2006). Culture collection of environmental microorgansims - the source for development of new environmental technologies. Proceedings of the Annual General Meeting of the European Culture Collections' Organization: ECCO XXV, Budapest, Hungary, June 7-10, 2006. Inkart Kft, 186.
5.2.
2006
Talpsep, E.; Truu, J.; Arro, K.; Heinaru, A. (2006). Microbial community analysis of the Lake Raadi using 16S rDNA clonal library and culture based methods. 2nd FEMS Congress of European Microbiologists; Madrid, Spain; July 4-8 2006. , 182.
5.2.
2006
Truu, J.; Truu, M.; Heinsoo, K. (2006). Influence of effluent irrigation on soil microbiological parameters under willow copice. Phytotechnologies lessons from pilot and field scale. Phytotechnologies - lessons from pilot and field scale: COST 859 (Phytotechnologies to promote sustainable land use and improve food safety),WG4 meeting; Sintra, Lisbon; 27th-29th April 2006. , 34.
6.3.
2006
Ivask, M.; Kuu, A.; Truu, M.; Truu, J. (2006). Mullatüübi ja niiskusetingimuste mõju põllumuldade vihmaussikooslustele = The effect of soil type and soil moisture on earthworm communities. Agraarteadus, 1, 3−11.
1.1.
2005
Wulff, A.; Vilbaste, S.; Truu, J. (2005). Depth distribution of photosynthetic pigments and diatoms in the sediments of a microtidal fjord. Hydrobiologia, 534, 117−130.
1.1.
2005
Truu, J.; Nurk, K.; Juhanson, J.; Mander, U. (2005). Variation of microbiological parameters within planted soil filter for domestic wastewater treatment. Journal of Environmental Science and Health Part A-Toxic/Hazardous Substances & Environmental Engineering, 40, 1191−1200.
1.1.
2005
Heinaru, E.; Merimaa, M.; Viggor, S.; Lehiste, M.; Leito, I.; Truu, J.; Heinaru, A. (2005). Biodegradation efficiency of functionally important populations selected for bioaugmentation in phenol- and oil-polluted area. FEMS Microbiology Ecology, 51 (3), 363−373.
1.1.
2005
Nurk, K.; Truu, J.; Truu, M.; Mander, U. (2005). Microbial characteristics and nitrogen transformation in planted soil filter for domestic wastewater treatment. Journal of Environmental Science and Health Part A-Toxic/Hazardous Substances & Environmental Engineering, 40, 1201−1214.
1.1.
2005
Leito, A.; Ojaste, I.; Truu, J.; Palo, A. (2005). Nest site selection of the Eurasian Crane Grus grus in Estonia: an analysis of nest record cards. Ornis Fennica, 82 (2), 44−54.
2.2.
2005
Leito, A.; Keskpaik, J.; Ojaste, I.; Truu, J. (2005). Sookurg. Tartu: Eesti Loodusfoto.
3.2.
2005
Truu, M.; Truu, J.; Ivask, M. (2005). Mahe-ja tavatootmise mõju mikroobsetele protsessidele põllumuldes. Lillak, R.; Viiralt, R.; Geherman, V.; Linke, A. (Toim.). Eesti Põllumajandusülikooli teadustööde kogumik (12−14). . Tartu: Estonian Agricultural University.
3.4.
2005
Truu, J.; Juhanson, J.; Kriipsalu, M.; Seene, M. (2005). Phytoremediation of landfill leachate in constructed wetland. Proceedings of Kalmar EcoTech´ 05: Kalmar EcoTech´ 05, Kalmar, Sweden, November 28-30. Ed. Hogland, W.; Broby, T. Kalmar, Sweden, 441−446.
3.4.
2005
Truu, J.; Juhanson, J.; Heinaru, E.; Vedler, E.; Merimaa, M.; Heinaru, A. (2005). Impact of phytoremediation and bioaugmentation on microbial community in oil shale chemical industry solid waste. Proceedings of Kalmar EcoTech´ 05: Kalmar EcoTech´05; Kalmar, Sweden; 28-30 November, 2005. Ed. Hogland, W.; Broby, T. Kalmar, Sweden, 433−439.
3.4.
2005
Viggor, Signe; Heinaru, Eeva; Truu, Jaak; Heinaru, Ain (2005). Kinetics of phenol degradation by selected bacterial strains with different genetic properties. Proceedings Kalmar ECO-TECH'05: Kalmar ECO-TECH'05, Kalmar,Swedwn, 28-30 November 2005. Kalmar, Sweden, 315−324.
5.2.
2005
Lõhmus, K., Truu, M., Truu, J., Ostonen, I., Alama, S., Vares, A., Uri, V., and Kanal, A. (2005). Alders create favourable environment for microbes at their soil-root interface in abandoned agricultural areas and opencast oil shale mining spoil. Plant nutrition for food security, human health and environment protection.: Fifteenth International Plant Nutrition Colloquium, Beijing, 2005. Ed. C. J. Li et al.,., 492−493.
5.2.
2005
Nurk, K.; Truu, J.; Mander, Ü. (2005). Impact of enhanced aeration on the microbial characteristics of a horizontal flow planted soil filter treating domestic wastewater. 9th International Symposium on wetland Pollutant Dynamics and Control, Universiteit Ghent, 2005: 9th International Symposium on wetland Pollutant Dynamics and Control WETPOL 2005; Ghent; 4-8.09.2005. Universiteit Gent. , 126−128.
5.2.
2005
Heinaru, E.; Merimaa, M.; Lehiste, M.; Truu, J.; Heinaru, A. (2005). Functional co-adaptation of phenol hydroxylase and catechol 2,3-dioxygenase genes of different catabolic pathways in phenol- and p-cresol-degrading bacteria. 8th Symposium on Bacterial Genetics & Ecology: Lyon, France; 26-29 June, 2005. Lyon, 54.
5.2.
2005
Merimaa, M.; Truu, J.; Heinaru, E. (2005). Polyphasic taxonomic study of pseudomonads: reclassification of Pseudomonas corrugata strain PC17 as Pseudomonas fluorescens. ECCO XXIV European Culture Collections: resources for biology and biotechnology; Riga, Latvia; 25-27 May, 2005. , 49−50.
1.1.
2004
Vares, A.; Lohmus, K.; Truu, M.; Truu, J.; Tullus, H.; Kanal, A. (2004). Productivity of black alder (Alnus glutinosa (L.) Gaertn.) plantations on reclaimed oil-shale mining detritus and mineral soils in relation to rhizosphere conditions. Oil Shale, 21 (1), 43−58.
1.1.
2004
Sepp, K.; Mikk, M.; Mand, M.; Truu, J. (2004). Bumblebee communities as an indicator for landscape monitoring in the agri-environmental programme. Landscape and Urban Planning, 67, 173−183.
1.3.
2004
Leito, Aivar; Truu, Jaak (2004). Valgepõsk-lagle (Branta leucopsis) leviku ja arvukuse muutused Eestis. Estonia Maritima, 6, 111−127.
1.3.
2004
Leito, Aivar; Õunsaar, Maris; Truu, Jaak (2004). Sügisrändel peatuvate sookurgede levik ja arvukus Hiiumaal ning seos põllumajandusega. Hirundo : Eesti Ornitoloogiaühingu ajakiri, 17 (1), 19−24.
2.3.
2004
Truu, J. (2004). Oil shale industry wastewater: impact on river microbial community and possibilities for bioremediation. (Doktoritöö, Tartu Ülikool; Bioloogia-geograafiateaduskond; Geneetika õppetool). Tartu: Tartu University Press.
3.1.
2004
Truu, J.; Heinaru, E.; Vedler, E.; Viirmäe, M.; Juhanson, J.; Talpsep, E.; Heinaru, A. (2004). Remediation of oil shale chemical industry solid wastes using phytoremediation and bioaugmentation. Proceedings of the European Symposium on Environmental Biotechnology, Oostende, Belgium, April 25 - 28, Balkema: European Symposium on Environmental Biotechnology, Oostende, Belgium, April 25 - 28, Balkema. , 467−471.
3.2.
2004
Jaagus, J.; Truu, J. (2004). Climatic regionalisation of Estonia based on multivariate exploratory techniques. In: Tiia Kaare; Jaan-Mati Punning (Ed.). Estonia. Geographical Studies (41−55). . Tallinn: Estonian Academy Publishers.
3.2.
2004
Lõhmus, K.; Truu, M.; Ostonen, I.; Truu, J.; Kanal, A.; Ivask, M.; Alama, S.; Vares, A.; Uri, V.; Külla, T.; Kurvits, V. (2004). Puuliigi ja mulla koosmõju risosfääriprotsessidele. Reintam, L. (Toim.). Muld ökosüsteemis, seire ja kaitse (118−142). . Tartu- Tallinn: Eesti Teaduste Akadeemia Kirjastus.
3.2.
2004
Leito, A.; Ojaste, I.; Truu, J.; Keskpaik, J.; Palo, A. (2004). Sookure pesitsemine Eestis. Eesti Looduseuurijate Seltsi aastaraamat (157−189). . Tartu: Eesti Looduseuurijate Selts.
5.2.
2004
Viggor, Signe; Heinaru, Eeva; Truu, Jaak; Heinaru, Ain (2004). Comparison of kinetic parameters for phenol- and p-cresol-degrading activity. In: NATO Advanced Research Workshop. Bioremediation of soils contaminated with aromati compounds: effects of rhizospher, bioavailability, gene regulation and stress adaptation (52). Bioremediation of soils contaminated with aromati compounds: effects of rhizospher, bioavailability, gene regulation and stress adaptationTartu, Estonia, 1-3 July 2004. Tartu, Estonia.
1.1.
2003
Leito, A.; Truu, J.; Leivits, A.; Ojaste, I. (2003). Changes in distribution and numbers of the breeding population of the Common Crane Grus grus in Estonia. Ornis Fennica, 80 (4), 159−171.
1.1.
2003
Vilbaste, S.; Truu, J. (2003). Distribution of benthic diatoms in relation to environmental variables in lowland streams. Hydrobiologia, 493, 81−93.
1.1.
2003
Jaagus, J.; Truu, J.; Ahas, R.; Aasa, A. (2003). Spatial and temporal variability of climatic seasons on the East European Plain in relation to large-scale atmospheric circulation. Climate Research, 23 (2), 111−129.
1.1.
2003
Truu, J.; Talpsep, E.; Heinaru, E.; Vedler, E.; Heinaru, A. (2003). Phytoremediation of solid oil shale waste from the chemical industry. Acta Biotechnologica, 23, 301−307.
1.1.
2003
Truu, J.; Talpsep, E.; Vedler, E.; Heinaru, E.; Heinaru, A. (2003). Enhanced biodegradation of oil shale chemical industry solid wastes by phytoremediation and bioaugmentation. Oil Shale, 20 (3), 421−428.
3.4.
2003
Kärme, L.; Truu, J.; Talpsep, E.; Heinaru, A. (2003). Purtse jõe vesikonna vee ja setete mikroobikoosluste analüüs. T. Frey (Toim.). Kaasaegse ökoloogia probleemid (110−116). . Teadusühing IM SAARE.
3.4.
2003
Talpsep, E.; Truu, J.; Arro, K.; Heinaru, A. (2003). Raadi järve bakterikoosluse mitmekesisus. Kaasaegse ökoloogia probleemid. Toim. T. Frey. Teadusühing IM SAARE, 320−325.
3.4.
2003
Truu, J.; Kärme, L.; Vedler, E.; Talpsep, E.; Heinaru, E.; Viirmäe, M.; Heinaru, A. (2003). Taimestiku ja looduslike mikroobide kooskasutamine saasteainete biodegradatsiooni võimendamiseks poolkoksis. Kaasaegse ökoloogia probleemid. Toim. T. Frey. Teadusühing IM SAARE, 334−337.
3.5.
2003
Vilbaste, Sirje; Truu, Jaak (2003). Keskkonnafaktorite mõju jõgede perifüütoni ränivetikate levikule Lääne-Eesti neljas vesikonnas. Kaasaegse ökoloogia probleemid: Eesti IX Ökoloogiakonverents, Tartu, 11.-12. aprill, 2003. Toim. T. Frei. Tartu: Teadusühing IM SAARE, 338−343.
3.5.
2003
Ivask, M.; Truu, J.; Kuu, A.; Jaanimäe, J. (2003). Niitude vihmaussikoosluste mitmekesisus. IX Eesti Ökoloogiakonverents "Eesti ökoloogia globaliseeruvas maailmas": IX Eesti Ökoloogiakonverents; Tartu; 11-12 Aprill, 2003. Teadusühing "IM Saare", 43−50.
5.2.
2003
Truu, M.; Truu, J.; Lõhmus, K.; Ivask, M; Kanal, A. (2003). Microbial activity, biomass and community structure in soil-root interface and bulk soil under Scots pine, Norway spruce and silver birch. FEMS 2003 - 1st Congress of European Microbiologists; Ljubljana, Slovenia; June 29 - July 3, 2003. Slovenia, 425.
5.2.
2003
Lõhmus, K.; Kanal, A.; Truu, J.; Truu, M.; Vares, A.; Ostonen, I.; Mander, Ü. (2003). Rhizosphere effect on distribution P, B, Pb and Cd in the root zone of tree seedlings in reclaimed oil-shale mining detritus. Proceedings 7th International Conference on the Biogeochemistry of Trace Elements, 4: 7th International Conference on the Biogeochemistry of Trace Elements; Uppsala, Sweden; 15-19 June, 2003. Ed. Cobran, R. Sweden, 157−158.
5.2.
2003
Leito, Aivar; Truu, Jaak; Keskpaik, Jüri (2003). Breeding habitat selection by Common Crane in Estonia. Vth European Crane Conference: Vth European Crane Conference, 10-13 April 2003, Sweden. Preface, Programme, Abstracts. , 33.
1.1.
2002
Truu, J.; Heinaru, E.; Talpsep, E.; Heinaru, A. (2002). Analysis of river pollution data from low-flow period by means of multivariate technique. A case study from the oil-shale industry region, Northeastern Estonia. Environmental Science and Pollution Research, 1, 8−14.
1.2.
2002
Truu, J.; Talpsep, E.; Heinaru, E.; Heinaru, A. (2002). Self-purification processes in Estonian rivers receiving sewage from oil shale processing industry. Archiv für Hydrobiologie, 141, 459−469.
3.4.
2002
Heinaru, A.; Heinaru, E.; Talpsep, E.; Truu, J. (2002). Application of data from field-and labscale microbiological studies for treatment of phenolic leachate in natural systems. KALMAR ECO-TECH'01, leachate and Wastewater Treatment with High-Tech and Natural systems. Kalmar, 147−150.
5.2.
2002
Jaagus, J.; Truu, J.; Ahas, R.; Aasa, A. (2002). Spatial and temporal variability of climatic seasons on the East European Plain in relation to large-scale atmospheric circulation. Abstracts: 4th European Conference on Applied Climatology (ECAC); Brussels; 12.-15.11.2002. Brussels: Royal Meteorological Institute Belgium, 245.
1.1.
2001
Heinaru, E.; Viggor, S.; Vedler, E.; Truu, J.; Merimaa, M.; Heinaru, A. (2001). Reversible accumulation of p-hydroxybenzoate and catechol determines the sequential decomposition of phenolic compounds in mixed substrate cultivations in pseudomonads. FEMS Microbiology Ecology, 37 (1), 79−89.
3.1.
2001
Mänd, M.; Sepp, K.; Truu, J. (2001). Landscape structure and bumble bee communities. In: P. Benedek, K.W. Richards (Ed.). VIII International Symposium on Pollination - Pollination: Integrator of Crops and Native Plant Systems (159−164). . Leuven, Belgium: ISHS. (Acta Horticulturae; 561).
3.4.
2001
Kuu, A.; Ivask, M.; Truu, J. (2001). Diversity of soil invertebrates in ecologically and conventionally managed soils. IALE European Conference 2001. Development of European Landscapes. Conference Proceedings, Vol II: IALE European Conference 2001. Development of European Landscapes; June 30 - July 2, 2001, Stockholm ; July 3-6, 2001, Tartu. Tartu, 706−712. (Publicationes Instituti Geographici Universitatis Tartuensis; 92).
3.4.
2001
Truu, J., Truu, M., Lõhmus, K., Ostonen, I, Ivask, M, Kanal, A. (2001). Structure and activity of microbial communities in soil-root interface and bulk soil in coniferous and decidous stands. Roots the dynamics interface between plants and the Earth: 6th ISRR Symposium; Nagoya, Japan; 11.-15.11.2001. , 402−403.
3.4.
2001
Ivask, Mari; Truu, Jaak; Truu, Marika; Sepp, Kalev (2001). Effect of agricultural management practices on soil biota. IALE European Conference 2001 "Development of European Landscapes" : Conference proceedings. 2, 688−693.
3.4.
2001
Sepp, K.; Mänd, M.; Truu, J. (2001). The influence of landscape pattern on bumble bee communities. IALE European Conference 2001 "Development of European Landscapes" : Conference proceedings. 1. , 89−92.
5.2.
2001
Heinaru, E.; Viggor, S.; Truu, J.; Heinaru, A. (2001). Reversible accumulation of intermediates determines the sequential decomposition of phenolic compounds from their mixtures by pseudomonads. In: ISME-9, Interactions in the microbial world, Final programme and abstracts (124). Amsterdam, Netherland 26-31 August 2001.
1.1.
2000
Vilbaste, S.; Sundback, K.; Nilsson, C.; Truu, J. (2000). Distribution of benthic diatoms in the littoral zone of the Gulf of Riga, the Baltic Sea. European Journal of Phycology , 35 (4), 373−385.
1.1.
2000
Heinaru, E.; Truu, J.; Stottmeister, U.; Heinaru, A. (2000). Three types of phenol and p-cresol catabolism in phenol- and p-cresol-degrading bacteria isolated from river water continuously polluted with phenolic compounds. FEMS Microbiology Ecology, 31 (3), 195−205.
1.2.
2000
Ivask, M; Truu, M.; Truu, J.; Lõhmus, K.; Ostonen, I. (2000). Earthworm Lumbricidae communities in alder and aspen forest: three case studies. BALTIC FORESTRY, 6 (1), 74−77.
5.2.
2000
Heinaru, A.; Mäe, A.; Truu, J.; Peters, M.; Nurk, A.; Talpsep, E. (2000). Survival and detection of nonindigeneous Pseudomonas putida in aquatic microcoms. Conference of the Estonian Society for Microbiology; Tartu, Estonia; 12.05.2000. Tartu: Tartu Ülikooli Kirjastus, 13.
5.2.
2000
Ivask, M.; Truu, J.; Truu, M. (2000). Maakasutuse mõju mullaelustikule. Loodusteaduslikud ülevaated Eesti Maa päeval : Eesti VIII ökoloogiakonverentsi lühiartiklid : Tartu, 26.-27. aprill 2000: Eesti ökoloogiakonverents; Tartu, Eesti; 26.-27.04.2000. , 49−55.
1.1.
1999
Koljalc, S.; Sults, I.; Raukas, E.; Truu, J.; Ustav, M.; Mikelsaar, M. (1999). Distribution of Acinetobacter baumannii in a neurointensive care unit. Scandinavian Journal of Infectious Diseases, 31 (2), 145−150.
1.1.
1999
Truu, J.; Talpsep, E.; Heinaru, E.; Stottmeister, U.; Wand, H.; Heinaru, A. (1999). Comparison of API 20NE and Biolog GN identification systems assessed by techniques of multivariate analyses. Journal of Microbiological Methods, 36 (3), 193−201.
1.2.
1999
Kanal, A.; Kuldkepp, P.; Truu, J. (1999). Microflora activity and chemical properties of Podzoluvisol in field experiment with different manures. Archives of Agronomy and Soil Science, 44, 507−521.
1.2.
1999
Ivask, M; Truu, J.; Truu, M.; Lõhmus, K.; Ostonen, I. (1999). The EarthwormCommunities and Microbial Activities in Coniferous Forests of Estonia. BALTIC FORESTRY, 5 (2), 32−36.
1.3.
1999
Ivask, M.; Truu, J.; Lõhmus, K.; Truu, M.; Ostonen, I. (1999). Mõnede lagundajakoosluste struktuur ja aktiivsus kuusikutes ja männikutes. Forestry Studies / Metsanduslikud Uurimused, 104−110.
1.1.
1998
Truu, J.; Noges, T.; Kunnis, K.; Truu, M. (1998). Incorporation of spatial structure into the analysis of relationships between environment and marine microbiological parameters. Hydrobiologia, 363, 283−288.
1.1.
1998
Ivask, M.; Truu, J. (1998). The relationship of Estonian earthworms to local habitat and soil factors. Pedobiologia, 42 (4), 378−384.
1.1.
1997
Talpsep, E.; Heinaru, E.; Truu, J.; Laht, T.; Heinaru, A.; Wand, H.; Stottmeister, U. (1997). Functional dynamics of microbial populations in waters contaminated with phenolic leachate. Oil Shale, 14 (4), 435−453.
1.1.
1997
Truu, J.; Alamae, T.; Heinaru, E.; Talpsep, E.; Kokassaar, U.; Heinaru, A.; Tenno, T. (1997). Impact of oil shale mine water on microbiological and chemical composition of north-eastern Estonian rivers. Oil Shale, 14 (4), 526−532.
3.2.
1996
Truu, J.; Tasa, A.; Tooming, A.; Roose, T. (1996). Investigation of nitrogen cycle components on watershed of river Porijõgi. In: Alekand, K. (Ed.). Aineringe uuringud põllumajanduslikel valgaladel (39−46). . Tartu: Eesti Põllumajandusülikool. (Transactions of Estonian Agricultural University; 186).
3.4.
1995
Laht, T.; Talpsep, E.; Heinaru, E.; Truu, J.; Peters, M.; Wand, H.; Stottmeister, U.; Heinaru, A. (1995). Population genetics of toxic chemical degrading bacteria in polluted environment. Environmental Research in Finland Today: Proceedings Second Finnish Conference of Environmental Sciences. Helsinki. Finland, 33−36.
1.09.2021

Jaak Truu

https://etis.ee/CV/Jaak_Truu/eng
3.06.1967
7375021
jaak.truu@ut.ee

Career

Institutions and positions
01.09.2018–...   
University of Tartu, Faculty of Science and Technology, Institute of Molecular and Cell Biology, Professor in Microbiology (1,00)
01.09.2016–31.08.2018   
University of Tartu, Faculty of Science and Technology, Institute of Ecology and Earth Sciences, Professor in Ecotechnology (1,00)
01.01.2016–31.08.2016   
University of Tartu, Faculty of Science and Technology, Institute of Ecology and Earth Sciences, Professor in Ecotechnology (1,00)
01.02.2013–31.12.2015   
University of Tartu, Faculty of Science and Technology (old), Institute of Ecology and Earth Sciences, Tartu University, Professor in Ecotechnology (1,00)
01.01.2012–31.01.2013   
University of Tartu, Faculty of Science and Technology (old), Institute of Ecology and Earth Sciences, Tartu University, Professor in Ecotechnology (0,50)
01.01.2012–31.01.2013   
University of Tartu, Faculty of Science and Technology (old), Institute of Ecology and Earth Sciences, Tartu University, Senior Research Fellow in Ecotechnology (0,50)
01.09.2011–31.12.2012   
University of Tartu, Faculty of Science and Technology (old), Institute of Ecology and Earth Sciences, Tartu University, Senior Researcher (0,50)
01.09.2011–31.12.2011   
University of Tartu, Faculty of Science and Technology (old), Institute of Ecology and Earth Sciences, Tartu University, Professor in Ecotechnology (0,10)
01.09.2011–31.12.2011   
University of Tartu, Faculty of Science and Technology (old), Institute of Ecology and Earth Sciences, Tartu University, Senior Research Fellow in Ecotechnology (0,90)
01.02.2011–31.08.2011   
University of Tartu, Faculty of Science and Technology (old), Institute of Ecology and Earth Sciences, Tartu University, Senior Research Fellow in Ecotechnology (1,00)
2010–31.08.2013   
Competence Centre on Health Technologies, Other staff (0,10)
01.01.2008–31.01.2011   
University of Tartu, Faculty of Science and Technology (old), Institute of Molecular and Cell Biology, University of Tartu, Senior Research Fellow (1,00)
01.09.2007–31.12.2007   
Tallinn University of Technology , Extraordinary Associate Professor (0,20)
01.02.2006–31.12.2007   
University of Tartu, Faculty of Biology and Geography, Institute of Molecular and Cell Biology, Senior Research Fellow (1,00)
2005–2006   
Tallinn University of Technology , Tartu College of TUT, Associate Professor (0,25)
01.09.2004–31.01.2006   
University of Tartu, Faculty of Biology and Geography, Institute of Molecular and Cell Biology, Research Fellow (1,00)
1998–2006   
University of Tartu, Faculty of Biology and Geography, Institute of Molecular and Cell Biology, Researcher (1,00)
01.01.1992–31.12.1998   
Environmental Protection Institute, Estonian Agricultural University, researcher
01.01.1991–31.12.1992   
Institute of Ecology and Marine Research
 
 
Education
1994–2004   
PhD, Tartu University (Microbiology)
1992–1994   
MSc, Tartu University (Hydrobiology)
1985–1991   
Diploma from Tartu University (Microbiology)
 
 
R&D related managerial and administrative work
2020−...   
Member of management committee of the COST action CA19123 Protection, Resilience, Rehabilitation of damaged environment
2019−...   
Associate editor- Frontiers in Microbiology
2019−...   
Member of management committee of the COST CA18131 Statistical and machine learning techniques in human microbiome studies
2016−...   
Nordic Environmental Nucleotide Network - member of management committee
2015−...   
COST Review Panel Member (Engineering and technology)
2014−...   
Member of editorial board - Journal of Environmental Engineering and Landscape Management
2006−...   
Member of committee for new food at Ministry of Agriculture
2005−...   
Chairman of Estonian Society for Microbiology
2012−2015   
Member of management committe of the COST Action TD1107 'Biochar as option for sustainable resource management'
2011−2015   
Member of management committe of the COST Action ES1103 Microbial ecology & the earth system: collaborating for insight and success with the new generation of sequencing tools
2009−2011   
Member of comitee for national collections at Minstry of Education and Science
2006−2014   
Expert of Domain Comittee for Biomedicine and Molecular Biosciences of the COST (European CO-operation in the field of Scientific and Technical Research, ESF)
2005−2009   
Member of management comittee of the COST action 859 'Phytotechnologies'
 
 
Creative work
.
 
 
Additional information
Courses: Biotechnology in environmental management, Environmental microbiology, Environmental technologies, Practical course in biological processes in ecotechnology, Microbiome and environmental genomics

Qualifications

Academic degrees
Jaak Truu, Doctor's Degree, 2004, (sup) Ain Heinaru, Oil shale industry wastewater: impact on river microbial community and possibilities for bioremediation, University of Tartu, Faculty of Science and Technology (old), Institute of Molecular and Cell Biology, University of Tartu, Chair of Genetics.
 
 
Fields of research
ETIS CLASSIFICATION: 1. Biosciences and Environment; 1.2. Microbiology
 
 
Additional information
Doctor of Philosophy
University of Tartu, 2004

Projects in progress

Completed projects

Dissertations under supervision

Supervised dissertations

Publications

Category
Year
Publication
 
1.1.
2021
Devarajan, Arun Kumar; Muthukrishanan, Gomathy; Truu, Jaak; Truu, Marika; Ostonen, Ivika; S., Subramanian Kizhaeral; Panneerselvam, Periyasamy; Gopalasubramanian, Sabarinathan Kuttalingam; (2021). The Foliar Application of Rice Phyllosphere Bacteria induces Drought-Stress Tolerance in Oryza sativa (L.). In: Plants. DOI: 10.3390/plants10020387.
1.1.
2021
Marcos-Zambrano, Laura Judith; Karaduzovic-Hadziabdic, Kanita; Loncar Turukalo, Tatjana; Przymus, Piotr; Trajkovik, Vladimir; Aasmets, Oliver; Berland, Magali; Gruca, Aleksandra; Hasic, Jasminka; Hron, Karel; Klammsteiner, Thomas; Kolev, Mikhail; Lahti, Leo; Lopes, Marta B.; Moreno, Victor; Naskinova, Irina; Org, Elin; Paci??ncia, In??s; Papoutsoglou, Georgios; Shigdel, Rajesh ... (2021). Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment. Frontiers in Microbiology , 12, 313. DOI: 10.3389/fmicb.2021.634511.
1.1.
2021
Moreno-Indias, Isabel; Lahti, Leo; Nedyalkova, Miroslava; Elbere, Ilze; Roshchupkin, Gennady; Adilovic, Muhamed; Aydemir, Onder; Bakir-Gungor, Burcu; Santa Pau, Enrique Carrillo-de; D???Elia, Domenica; Desai, Mahesh S.; Falquet, Laurent; Gundogdu, Aycan; Hron, Karel; Klammsteiner, Thomas; Lopes, Marta B.; Marcos-Zambrano, Laura Judith; Marques, Cl??udia; Mason, Michael; May, Patrick ... (2021). Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions. Frontiers in Microbiology , 12, 277. DOI: 10.3389/fmicb.2021.635781.
1.1.
2021
Tiirik, K.; Nõlvak, H.; Truu, M.; Peeb, A.; Kõiv-Vainik, M.; Truu, J. (2021). The effect of the effluent from a small-scale conventional wastewater treatment plant treating municipal wastewater on the composition and abundance of the microbial community, antibiotic resistome, and pathogens in the sediment and water of a receiving stream. Water (Switzerland), 13 (6). DOI: 10.3390/w13060865.
1.1.
2021
Samaddar, S.; Truu, J.; Chatterjee, P.; Oopkaup, K.; Truu, M.; Kim, K.; Kim, S.; Schmidt, R.; Roy Choudhury, A.; Choi, J.; Sa, T. (2021). Long-term inorganic nitrogen application changes the ammonia-oxidizing archaeal community composition in paddy soils. European Journal of Soil Science. DOI: 10.1111/ejss.13112.
1.1.
2020
Kanger, K.; Guilford, N.G.H.; Lee, H.W.; Nesbø, C.L.; Truu, J.; Edwards, E.A. (2020). Antibiotic resistome and microbial community structure during anaerobic co-digestion of food waste, paper and cardboard. FEMS Microbiology Ecology, 96 (2). DOI: 10.1093/femsec/fiaa006.
1.1.
2020
Kundel, Dominika; Bodenhausen, Natacha; Jørgensen, Helene Bracht; Truu, Jaak; Birkhofer, Klaus; Hedlund, Katarina; Mäder, Paul; Fliessbach, Andreas (2020). Effects of simulated drought on biological soil quality, microbial diversity and yields under long-term conventional and organic agriculture. FEMS Microbiology Ecology. DOI: 10.1093/femsec/fiaa205.
1.1.
2020
Truu, Marika; Nõlvak, Hiie; Ostonen, Ivika; Oopkaup, Kristjan; Maddison, Martin; Ligi, Teele; Espenberg, Mikk; Uri, Veiko; Mander, Ülo; Truu, Jaak (2020). Soil Bacterial and Archaeal Communities and Their Potential to Perform N-Cycling Processes in Soils of Boreal Forests Growing on Well-Drained Peat. Frontiers in Microbiology, 11. DOI: 10.3389/fmicb.2020.591358.
1.1.
2019
Truu, Marika; Oopkaup, Kristjan; Krustok, Ivo; Kõiv-Vainik, Margit; Nõlvak, Hiie; Truu, Jaak (2019). Bacterial community activity and dynamics in the biofilm of an experimental hybrid wetland system treating greywater. Environmental Science and Pollution Research, 26 (4), 4013−4026. DOI: 10.1007/s11356-018-3940-8.
1.1.
2019
Jorgensen, K. S.; Kreutzer, A.; Lehtonen, K. K.; Kankaanpaa, H.; Rytkonen, J.; Wegeberg, S.; Gustavson, K.; Fritt-Rasmussen, J.; Truu, J.; Kouts, T.; Lilover, M.-J.; Seiler, T.-B.; Hollert, H.; Johann, S.; Marigomez, J.; Soto, M.; Lekube, X.; Jenssen, B. M.; Ciesielski, T. M.; Wilms, L. B. ... Wang, F. (2019). The EU Horizon 2020 project GRACE: integrated oil spill response actions and environmental effects. Environmental Sciences Europe, 31 (44), 1−10. DOI: 10.1186/s12302-019-0227-8.
1.1.
2019
Joe, Manoharan Melvin; Gomathi, Ram; Benson, Abitha; Shalini, Devaraj; Rengasamy, Parthasarathi; Henry, Allen John; Truu, Jaak; Truu, Marika; Sa, Tongmin (2019). Simultaneous Application of Biosurfactant and Bioaugmentation with Rhamnolipid-Producing Shewanella for Enhanced Bioremediation of Oil-Polluted Soil. Applied Sciences-basel, 9 (18), ARTN 3773. DOI: 10.3390/app9183773.
1.1.
2019
Abdalla, Mohamed; Hastings, Astley; Cheng, Kun; Yue, Qian; Chadwick, Dave; Espenberg, Mikk; Truu, Jaak; Rees, Robert M.; Smith, Pete (2019). A critical review of the impacts of cover crops on nitrogen leaching, net greenhouse gas balance and crop productivity. Global Change Biology, 25 (8), 2530−2543. DOI: 10.1111/gcb.14644.
1.1.
2019
Samaddar, Sandipan; Chatterjee, Poulami; Truu, Jaak; Anandham, Rangasamy; Kim, Sukjin; Sa, Tongmin (2019). Long-term phosphorus limitation changes the bacterial community structure and functioning in paddy soils. Applied Soil Ecology, 134, 111−115. DOI: 10.1016/j.apsoil.2018.10.016.
1.1.
2019
Štšepetova, Jelena; Truu, Jaak; Runnel, Riina; Nõmmela, Rita; Saag, Mare; Olak, Jana; Nõlvak, Hiie; Preem, Jens-Konrad; Oopkaup, Kristjan; Krjutškov, Kaarel; Honkala, Eino; Honkala, Sisko; Mäkinen, Kauko; Mäkinen, Pirkko-Liisa; Vahlberg, Tero; Vermeiren, Joan; Bosscher, Douwina; de Cock, Peter; Mändar, Reet (2019). Impact of polyols on Oral microbiome of Estonian schoolchildren. BMC Oral Health, 19, ARTN 60. DOI: 10.1186/s12903-019-0747-z.
1.1.
2019
Samaddar, Sandipan; Truu, Jaak; Chatterjee, Poulami; Truu, Marika; Kim, Kiyoon; Kim, Sukjin; Seshadri, Sundaram; Sa, Tongmin (2019). Long-term silicate fertilization increases the abundance of Actinobacterial population in paddy soils. Biology and Fertility of Soils, 55 (2), 109−120. DOI: 10.1007/s00374-018-01335-6.
1.1.
2018
Pärn, Jaan; Verhoeven, Jos T. A.; Butterbach-Bahl, Klaus; Dise, Nancy B.; Ullah, Sami; Aasa, Anto; Egorov, Sergey; Espenberg, Mikk; Järveoja, Järvi; Jauhiainen, Jyrki; Kasak, Kuno; Klemedtsson, Leif; Kull, Ain; Laggoun-Défarge, Fatima; Lapshina, Elena D.; Lohila, Annalea; Lõhmus, Krista; Maddison, Martin; Mitsch, William J.; Müller, Christoph ... Mander, Ülo (2018). Nitrogen-rich organic soils under warm well-drained conditions are global nitrous oxide emission hotspots. Nature Communications, 9, Article number: 1135. DOI: 10.1038/s41467-018-03540-1.
1.1.
2018
Espenberg, Mikk; Truu, Marika; Mander, Ülo; Kasak, Kuno; Nõlvak, Hiie; Ligi, Teele; Oopkaup, Kristjan; Maddison, Martin; Truu, Jaak (2018). Differences in microbial community structure and nitrogen cycling in natural and drained tropical peatland soils. Scientific Reports, 8, ARTN 4742. DOI: 10.1038/s41598-018-23032-y.
1.1.
2018
Nõlvak, Hiie; Truu, Marika; Oopkaup, Kristjan; Kanger, Kärt; Krustok, Ivo; Nehrenheim, Emma; Truu, Jaak (2018). Reduction of antibiotic resistome and integron-integrase genes in laboratory-scale photobioreactors treating municipal wastewater. Water Research, 142, 363−372. DOI: 10.1016/j.watres.2018.06.014.
1.1.
2018
Tipayno, Sherlyn C.; Truu, Jaak; Samaddar, Sandipan; Truu, Marika; Preem, Jens-Konrad; Oopkaup, Kristjan; Espenberg, Mikk; Chatterjee, Poulami; Kang, Yeongyeong; Kim, Kiyoon; Sa, Tongmin (2018). The bacterial community structure and functional profile in the heavy metal contaminated paddy soils, surrounding a nonferrous smelter in South Korea. Ecology and Evolution, 8 (12), 6157−6168. DOI: 10.1002/ece3.4170.
1.1.
2017
Mändar, Reet; Punab, Margus; Korrovits, Paul; Türk, Silver; Ausmees, Kristo; Lapp, Eleri; Preem, Jens-Konrad; Oopkaup, Kristjan; Salumets, Andres; Truu, Jaak. (2017). Seminal microbiome in men with and without prostatitis. International Journal of Urology, 24 (3), 211−216. DOI: 10.1111/iju.13286.
1.1.
2017
Ostonen, Ivika; Truu, Marika; Helmisaari, Heljä-Sisko; Lukac, Martin; Vanguelova, Elena; Godbold, Douglas L; Lõhmus, Krista; Zang, Ulrich, Tedersoo, Leho; Preem, Jens-Konrad; Rosenvald, Katrin; Aosaar, Jürgen; Armolaitis, Kestutis; Frey, Jane; Kabral, Naima; Kukumägi, Mai; Leppälammi-Kujansuu, Jaana; Lindroos, Antti-Jussi; Merilä, Päivi; Napa, Ülle; Nöjd, Pekka ... Truu, Jaak (2017). Adaptive root foraging strategies along a boreal-temperate forest gradient. New Phytologist, 215 (3), 977−991. DOI: 10.1111/nph.14643.
5.2.
2017
Mander, Ü.; Maddison, M.; Truu, M.; Truu, J.; Espenberg, M.; Teemusk, A; Torga, R; Soosaar, K; Uri, V. (2017). Full-drained peatland forests as nitrous oxide sources. Geophysical Research Abstracts, 19: European Geosciences Union General Assembly 2017. Vienna: European Geosciences Union, 1−1. (EGU2017-5266).
1.1.
2016
Krustok, I.; Odlare, M.; Truu, J.; Nehrenheim, E. (2016). Inhibition of nitrification in municipal wastewater-treating photobioreactors: Effect on algal growth and nutrient uptake. Bioresource Technology, 202, 238−243. DOI: 10.1016/j.biortech.2015.12.020.
1.1.
2016
Nõlvak, H.; Truu, M.; Kanger, K.; Tampere, M.; Espenberg, M.; Loit, E.; Raave, H.; Truu, J. (2016). Inorganic and organic fertilizers impact the abundance and proportion of antibiotic resistance and integron-integrase genes in agricultural grassland soil. The Science of The Total Environment, 562, 678−689. DOI: 10.1016/j.scitotenv.2016.04.035.
1.1.
2016
Abdalla, Mohamed; Hastings, Astley; Truu, Jaak; Espenberg, Mikk; Mander, Ülo; Smith, Pete (2016). Emissions of methane from northern peatlands: a review of management impacts and implications for future management options. Ecology and Evolution, 1−23. DOI: 10.1002/ece3.2469.
1.1.
2016
Oopkaup, Kristjan; Truu, Marika; Nõlvak, Hiie; Ligi, Teele; Preem, Jens-Konrad; Mander, Ülo; Truu, Jaak; (2016). Dynamics of Bacterial Community Abundance and Structure in Horizontal Subsurface Flow Wetland Mesocosms Treating Municipal Wastewater. Water, 8 (10), 457. DOI: 10.3390/w8100457.
1.1.
2016
Espenberg, Mikk; Truu, Marika; Truu, Jaak; Maddison, Martin; Nõlvak, Hiie; Järveoja, Järvi; Mander, Ülo (2016). Impact of Reed Canary Grass Cultivation and Mineral Fertilisation on the Microbial Abundance and Genetic Potential for Methane Production in Residual Peat of an Abandoned Peat Extraction Area. PLoS ONE, 11 (9), e0163864−e0163864. DOI: 10.1371/journal.pone.0163864.
2.4.
2016
Kriipsalu, M.; Maastik, A.; Truu, J. (2016). Jäätmekäitlus ja pinnase tervendamine [Waste management and soil remediation]. Tallinn 2016: TTÜ kirjastus.
1.1.
2015
Mändar, Reet; Punab, Margus; Borovkova, Natalja; Lapp, Eleri; Kiiker, Riinu; Korrovits, Paul; Metspalu, Andres; Krjutškov, Kaarel; Nõlvak, Hiie; Preem, Jens-Konrad; Oopkaup, Kristjan; Salumets, Andres; Truu, Jaak. (2015). Complementary seminovaginal microbiome in couples. Research in Microbiology, 166 (5), 440−447. DOI: 10.1016/j.resmic.2015.03.009.
1.1.
2015
Smidt, Imbi; Kiiker, Riinu; Oopkaup, Helen; Lapp, Eleri; Rööp, Tiiu; Truusalu, Kai; Štšepetova, Jelena; Truu, Jaak; Mändar, Reet. (2015). Comparison of detection methods for vaginal lactobacilli. Beneficial Microbes, 6 (5), 747−751. DOI: 10.3920/BM2014.0154.
1.1.
2015
Krustok, Ivo; Odlare, Monica; Shabiimam, M.A.; Truu, Jaak; Truu, Marika; Ligi, Teele; Nehrenheim, Emma (2015). Characterization of algal and microbial community growth in a wastewater treating batch photo-bioreactor inoculated with lake water. Algal Research, 11, 421−427. DOI: 10.1016/j.algal.2015.02.005.
1.1.
2015
Kasak, Kuno; Mander, Ülo; Truu, Jaak; Truu, Marika; Järveoja, Järvi; Maddison, Martin; Teemusk, Alar (2015). Alternative filter material removes phosphorus and mitigates greenhouse gas emission in horizontal subsurface flow filters for wastewater treatment. Ecological Engineering, 77, 242−249. DOI: 10.1016/j.ecoleng.2015.01.038.
1.1.
2015
Mander, Ü.; Maddison, M.; Soosaar, K.; Koger, H.; Teemusk, A.; Truu, J.; Well, R.; Sebilo, M. (2015). The impact of a pulsing water table on wastewater purification and greenhouse gas emission in a horizontal subsurface flow constructed wetland. Ecological Engineering, 80, 69−78. DOI: 10.1016/j.ecoleng.2014.09.075.
1.1.
2015
Mander, Ülo; Maddison, Martin; Soosaar, Kaido; Teemusk, Alar; Kanal, Arno; Uri, Veiko;Truu, Jaak. (2015). The impact of a pulsing groundwater table on greenhouse gas emissions in riparian grey alder stands. Environmental Science and Pollution Research, 22 (4), 2360−2371. DOI: 10.1007/s11356-014-3427-1.
1.1.
2015
Ligi, Teele; Truu, Marika; Oopkaup, Kristjan; Nõlvak, Hiie; Mander, Ülo; William, J. Mitsch; Truu, Jaak (2015). The genetic potential of N2 emission via denitrification and ANAMMOX from the soils and sediments of a created riverine treatment wetland complex. Ecological Engineering, 80, 181−190. DOI: 10.1016/j.ecoleng.2014.09.072.
1.1.
2015
Chusova, O.; Nõlvak, H.; Odlare, M.; Truu, J.; Truu, M.; Oopkaup, K.; Nehrenheim, E. (2015). Biotransformation of pink water TNT on the surface of a low-cost adsorbent pine bark. Biodegradation, 26 (5), 375−386. DOI: 10.1007/s10532-015-9740-7.
1.1.
2015
Krustok, I.; Truu, J.; Odlare, M.; Truu, M.; Ligi, T.; Tiirik, K.; Nehrenheim, E. (2015). Effect of lake water on algal biomass and microbial community structure in municipal wastewater-based lab-scale photobioreactors. Applied Microbiology and Biotechnology, 99 (15), 6537−6549. DOI: 10.1007/s00253-015-6580-7.
1.2.
2015
Truu, Jaak; Truu, Marika; Espenberg, Mikk; Nõlvak, Hiie; Juhanson, Jaanis (2015). Phytoremediation And Plant-Assisted Bioremediation In Soil And Treatment Wetlands: A Review. The Open Biotechnology Journal, 9 (1), 1−15.
1.1.
2014
Mander, Ülo; Well, Rainer; Weymann, Daniel; Soosaar, Kaido; Maddison, Martin; Kanal, Arno; Lõhmus, Krista; Truu, Jaak; Augustin, Jürgen;Tournebize, Julien. (2014). Isotopologue Ratios of N2O and N2 Measurements Underpin the Importance of Denitrification in Differently N-Loaded Riparian Alder Forests. Environmental Science & Technology, 48 (20), 11910−11918. DOI: 10.1021/es501727h.
1.1.
2014
Chusova, O.; Nolvak, H.; Nehrenheim, E.; Truu, J.; Odlare, M.; Oopkaup, K.; Truu, M. (2014). Effect of pine bark on the biotransformation of trinitrotoluene and on the bacterial community structure in a batch experiment. Environmental Technology, 35 (19), 2456−2465. DOI: 10.1080/09593330.2014.909888.
1.1.
2014
Muter, O.; Berzins, A.; Strikauska, S., Pugajeva, I.; Bartkevics, V.; Dobele, G; Truu, J.; Truu, M.; Steiner, C. (2014). The effects of woodchip- and straw-derived biochars on the persistence of the herbicide 4-chloro-2-methylphenoxyacetic acid (MCPA) in soils. Ecotoxicology and Environmental Safety, 109, 93−100. DOI: 10.1016/j.ecoenv.2014.08.012.
1.1.
2014
Vengerfeldt, Veiko; Špilka, Katerina; Saag, Mare; Preem, Jens-Konrad; Oopkaup, Kristjan; Truu, Jaak; Mändar, Reet. (2014). Highly diverse microbiota in dental root canals in cases of apical periodontitis (data of Illumina sequencing). Journal of Endodontics, 40 (11), 1778−1783. DOI: 10.1016/j.joen.2014.06.017.
1.1.
2014
Leito, Aivar; Elts, Jaanus; Mägi, Eve; Truu, Jaak; Ivask, Mari; Kuu, Annely; Ööpik, Merle; Meriste, Mart; Ward, Raymond; Kuresoo, Andres; Pehlak, Hannes; Sepp, Kalev; Luigujõe, Leho (2014). Coastal grassland wader abundance in relation to breeding habitat characteristics in Matsalu Bay, Estonia. Ornis Fennica, 3, 149−165.
1.1.
2014
Mander, Ü.; Dotro, G.; Ebie, Y.; Towprayoon, S.; Chiemchaisri, C.; Nogueira, S.F.; Jamsranjav, B.; Kasak, K.; Truu, J.; Tournebize, J.; Mitsch, W.J. (2014). Greenhouse gas emission in constructed wetlands for wastewater treatment: a review. Ecological Engineering, 66, 19−35. DOI: 10.1016/j.ecoleng.2013.12.006.
1.1.
2014
Tiirik, Kertu; Nolvak, Hiie; Oopkaup, Kristjan; Truu, Marika; Preem, Jens-Konrad; Heinaru, Ain; Truu, Jaak (2014). Characterization of the bacterioplankton community and its antibiotic resistance genes in the Baltic Sea. Biotechnology and Applied Biochemistry, 61 (1), 23−32. DOI: 10.1002/bab.1144.
1.1.
2014
Ligi, T.; Oopkaup, K.; Truu, M.; Preem, J.-K.; Nõlvak, H.; Mitsch, W.J.; Mander, Ü.; Truu, J. (2014). Characterisation of bacterial communities in soil and sediment of a created riverine wetland complex using high-throughput 16S rRNA amplicon sequencing. Ecological Engineering, 72, 56−66. DOI: 10.1016/j.ecoleng.2013.09.007.
1.1.
2014
Ligi, T.; Truu, M.; Truu, J.; Nõlvak, H.; Kaasik, A.; Mitsch, W. J.; Mander, Ü. (2014). Effects of soil chemical characteristics and water regime on denitrification genes (nirS, nirK, and nosZ) abundances in a created riverine wetland complex. Ecological Engineering, 72, 47−55. DOI: 10.1016/j.ecoleng.2013.07.015.
3.2.
2014
Ligi, Teele; Truu, Marika; Oopkaup, Kristjan; Truu, Jaak (2014). Reostunud jõevett puhastava läbivooluliste tehismärgalade kompleksi pinnase bakterikoosluse struktuur ja lämmastiku ärastusega seotud protsesside geneetiline potentsiaal. Erki Tammiksaar, Taavi Pae, Ülo Mander (Toim.). Publicationes Instituti Geographici Universitatis Tartuensis (363−381). Tartu: Eesti Ülikoolide Kirjastus.
3.2.
2014
Kasak, Kuno; Truu, Marika; Truu, Jaak; Mander, Ülo (2014). Fosfori eemaldamine reoveest põlevkivituhasette abil horisontaalvoolulises pinnasfiltersüsteemis: mõju kasvuhoonegaaside emissioonile. Tammiksaar, Erki; Pae, Taavi; Mander, Ülo (Toim.). Publicationes Instituti Geographici Universitatis Tartuensis (330−341). . Tartu: Eesti Ülikoolide Kirjastus.
5.1.
2014
Tuppits, Ulrika; Orro, Toomas; Einarsson, Stig; Salumets, Andres; Truu, Jaak; Kavak, Ants (2014). The metagenomic analysis of the mares’ intrauterine fluid. Reproduction in Domestic Animals, 49: 18th Annual Conference of the European Society for Domestic Animal Reproduction (ESDAR), Helsinki,Finland, 11–13 September 2014. Ed. H. Rodriguez-Martinez. Blackwell Verlag Gmbh, 46−46. (s 3).
5.2.
2014
Kasemets, K.; Suppi, S.; Truu, J.; Kahru, A. (2014). Toxicity of silver nanoparticles to the microbial community of municipal wastewater treatment system. Book of Abstracts: 2nd Congress of Baltic Microbiologist, Tartu, Estonia, 16.10-19.10.2014.
5.2.
2014
Runnel, Riina; Saag, Mare; Olak, Jana; Honkala, Eino; Honkala, Sisko; Mäkinen, Kauko; Truu, Jaak; Štšepetova, Jelena; Mändar, Reet. (2014). Changes in Oral Microbiota After Long-term Daily Sugar Alcohols Using. IADR/PER Congress 10-13 September Dubrovnik, Croatia.
5.2.
2014
Mändar, R; Vengerfeldt, V; Špilka, K; Saag, M; Nõlvak, H; Preem, J; Oopkaup, K; Truu, J. (2014). Highly diverse root canal microbiota in chronic apical periodontitis according to Illumina sequencing. Anaerobe 2014, Chicago, June 28–July 1, 2014..
5.2.
2014
Mändar, R; Vengerfeldt, V; Špilka, K.; Saag, M; Nõlvak, H; Preem, J.-.K; Oopkaup, K.; Truu, J. (2014). Dental root canal microbiota in chronic apical periodontitis patients (data from Illumina sequencing). 24th ECCMID, Barcelona, May 10-13, 2014.. , eP499.
5.2.
2014
Mander, Ü; Ligi, T; Truu, M; Truu, J; Pärn, J; Egorov, S; Järveoja, J; Vohla, C; Maddison, M; Soosaar, K; Oopkaup, K; Teemusk, A; Preem, J-K; Uuemaa, E. (2014). Spatial patterns of denitrification and its functional genes in peatlands. Geophysical Research Abstracts, 16: EGU General Assembly 2014. Vienna: European Geosciences Union. (EGU2014-5482).
1.1.
2013
Viggor, Signe; Juhanson, Jaanis; Jõesaar, Merike; Mitt, Mario; Truu, Jaak; Vedler, Eve; Heinaru, Ain (2013). Dynamic changes in the structure of microbial communities in Baltic Sea coastal seawater microcosms modified by crude oil, shale oil or diesel fuel. Microbiological Research, 168 (7), 415−427. DOI: 10.1016/j.micres.2013.02.006.
1.1.
2013
Marja, Riho; Uuemaa, Evelyn; Mander, Ülo; Elts, Jaanus; Truu, Jaak (2013). Landscape pattern and census area as determinants of the diversity of farmland avifauna in Estonia. Regional Environmental Change, 13 (5), 1013−1020. DOI: 10.1007/s10113-013-0409-7.
1.1.
2013
Zhou, Y.; Tigane, T.; Li, X.; Truu, M.; Truu, J.; Mander, Ü. (2013). Hexachlorobenzene dechlorination in constructed wetland mesocosms. Water Research, 47 (1), 102−110. DOI: 10.1016/j.watres.2012.09.030.
1.1.
2013
Nõlvak, H.; Truu, J.; Limane, B.; Truu, M.; Cepurnieks, G.; Bartkevics, V.; Juhanson, J.; Muter, O. (2013). Microbial community changes in TNT spiked soil bioremediation trial using biostimulation, phytoremediation and bioaugmentation. Journal of Environmental Engineering and Landscape Management, 21 (3), 153−162. DOI: 10.3846/16486897.2012.721784.
1.1.
2013
Nõlvak, Hiie; Truu, Marika; Tiirik, Kertu; Oopkaup, Kristjan; Sildvee, Teele; Kaasik, Ants; Mander, Ülo; Truu, Jaak (2013). Dynamics of antibiotic resistance genes and their relationships with system treatment efficiency in a horizontal subsurface flow constructed wetland. The Science of The Total Environment, 461, 636−644. DOI: 10.1016/j.scitotenv.2013.05.052.
5.2.
2013
Truu, Jaak; Truu, Marika; Oopkaup, Kristjan; Preem, Jens-Konrad; Mander, Ülo (2013). Bacterial community composition and succession in subsurface flow constructed wetland assessed by Illumina sequencing. 2nd International Conference on Water Research; Singapur; 20-23.01.213.
5.2.
2013
Mändar, R.; Vengerfeldt, V.; Špilka, K.; Saag, M.; Nõlvak, H.; Preem, J.; Oopkaup, K.; Truu, J. (2013). Microbiota of dental root canal in case of chronic apical periodontitis (data of Illumina sequencing). 3rd ASMET - The ASM Emerging Technologies Conference; Izmir, Turkey; June 25-28, 2013.
5.2.
2013
Mändar, Reet; Borovkova, Natalja; Lapp, Eleri; Korrovits, Paul; Punab, Margus; Metspalu, Andres; Krjutškov, Kaarel; Nõlvak, Hiie; Preem, Jens; Oopkaup, Kristjan; Salumets, Andres; Truu, Jaak (2013). Seminal microbiome in male partners of infertile couples. Microbiome and Host Health; Lisbon, Portugal; May 12-14, 2013.
5.2.
2013
Mändar, Reet; Borovkova, Natalja; Lapp, Eleri; Korrovits, Paul; Punab, Margus; Metspalu, Andres; Krjutškov, Kaarel; Nõlvak, Hiie; Preem, Jens; Oopkaup, Kristjan; Salumets, Andres; Truu, Jaak. (2013). Genital tract microbiome in infertile couples. 36 th International Congress of the Society for Microbial Ecology and Disease; September 24-26, 2013, Kosice, Slovakia.
5.2.
2013
Kasemets, K; Suppi, S; Kahru, A; Nõlvak, H; Truu, M; Truu, J. (2013). Impact of silver nanoparticles on the microbial community of municipal wastewater trreatment system. 23rd SETAC Europe Annual Meeting, 12-16 May 2013, Glasgow.
1.1.
2012
Kõrs, Aive; Vilbaste, Sirje; Käiro, Kairi; Pall, Peeter; Piirsoo, Kai; Truu, Jaak; Viik, Malle (2012). Temporal changes in the composition of macrophyte communities and environmental factors governing the distribution of aquatic plants in an unregulated lowland stream, the River Emajõgi (Estonia). Boreal Environment Research, 17 (6), 460−472.
1.1.
2012
Preem, J.-K.; Truu, J.; Truu, M.; Mander, Ü.; Oopkaup, K.; Lõhmus, K.; Helmisaari, H.-S.; Uri, V.; Zobel, M. (2012). Bacterial community structure and its relationship to soil physico-chemical characteristics in alder stands with different management histories. Ecological Engineering, 49, 10−17. DOI: 10.1016/j.ecoleng.2012.08.034.
1.1.
2012
Nõlvak, H.; Truu, M.; Truu, J. (2012). Evaluation of quantitative real-time PCR workflow modifications on 16S rRNA and tetA gene quantification in environmental samples. The Science of The Total Environment, 426, 351−358. DOI: 10.1016/j.scitotenv.2012.03.054.
1.1.
2012
Salm, Jüri-Ott; Maddison, Martin; Tammik, Sille; Soosaar, Kaido; Truu, Jaak; Mander, Ülo (2012). Emissions of CO2, CH4 and N2O from undisturbed, drained and mined peatlands in Estonia. Hydrobiologia, 692 (1), 41−55. DOI: 10.1007/s10750-011-0934-7.
1.1.
2012
Zhou, Y.; Trestip, S.; Li, X.; Truu, M.; Truu, J.; Mander, Ü. (2012). Dechlorination of hexachlorobenzene in treatment microcosm wetlands. Ecological Engineering, 42, 249−255. DOI: 10.1016/j.ecoleng.2012.02.017.
1.1.
2012
Nõlvak, H.; Sildvee, T.; Kriipsalu, M.;Truu, J (2012). Application of microbial community profiling and functional gene detection for assessment of natural attenuation of petroleum hydrocarbons in boreal subsurface. Boreal Environment Research, 17, 113−127.
5.2.
2012
Mändar, R.; Truu, J.; Borovkova, N.; Punab, M. (2012). Effect of Sexual Intercourse on Vaginal Microbiome of Infertile Couples’ Women (data of Illumina sequencing). 52nd ICAAC: Interscience Conference on Antimicrobial Agents and Chemotherapy: 52nd ICAAC (Interscience Conference on Antimicrobial Agents and Chemotherapy), Sept. 9.-12, 2012, San Francisco (USA)..
5.2.
2012
Truu, Jaak; Mändar, Reet; Borovkova, Natalja; Lapp, Eleri; Korrovits, Paul; Punab, Margus; Metspalu, Andres; Krjutškov, Kaarel; Nõlvak, Hiie; Preem, Jens; Oopkaup, Kristjan; Salumets, A. (2012). Vaginal microbiome before and after intercourse by Illumina sequencing. 22nd EBCOG (European Congress of Obstetrics and Gynaecology) 2012, Tallinn, 9.-12.05.2012..
5.2.
2012
Truu, J.; Borovkova, N.; Lapp, E.; Korrovits, P.; Punab, M.; Metspalu, A.; Krjutškov, K.; Nõlvak, H.; Preem, J.; Oopkaup, K.; Salumets, A.; Mändar, R. (2012). Effect of sexual intercourse on vaginal microbiome of infertile couples’ women. International Human Microbiome Congress: International Human Microbiome Congress organized by MetaHIT, Paris (France) March 19-21, 2012..
5.2.
2012
Kasemets, K.; Kahru, A.; Truu, M; Truu, J. (2012). Emerging environmental contaminants in wastewater effluents – pharmaceutical’s residues and engineered nanoparticles: effect on the wastewater treatment and antibiotic resistance gene transfer in the environment. Finnish Society of Toxicology 33rd Annual Symposium, Finland, University of Jyväskylä, 16-17.04.2012. , 13.
1.1.
2011
Rosenvald, K.; Ostonen, I.; Truu, M.; Truu, J.; Uri, V.; Vares, A.; Lõhmus, K. (2011). Fine-root rhizosphere and morphological adaptations to site conditions in interaction with tree mineral nutrition in young silver birch (Betula pendula Roth.) stands. European Journal of Forest Research, 130 (6), 1055−1066. DOI: 10.1007/s10342-011-0492-6.
1.1.
2011
Soosaar, K.; Mander, Ü.; Maddison, M.; Kanal, A.; Kull, A.; Lõhmus, K.; Truu, J.; Augustin, J. (2011). Dynamics of gaseous nitrogen and carbon fluxes in riparian alder forests. Ecological Engineering, 37 (1), 40−53.
1.1.
2011
Rosenvald, Katrin; Kuznetsova, Tatjana; Ostonen, Ivika; Truu, Marika; Truu, Jaak; Uri, Veiko; Lõhmus, Krista (2011). Rhizosphere effect and fine-root morphological adaptations in a chronosequence of silver birch stands on reclaimed oil shale post-mining areas. Ecological Engineering, 37 (7), 1027−1034. DOI: 10.1016/j.ecoleng.2010.05.011.
1.2.
2011
Sepp, Mait; Palm, Vello; Leito, Aivar; Päädam, Kalev; Truu, Jaak (2011). Effect of atmospheric circulation types on spring arrival of migratory birds and long-term trends in the first arrival dates in Estonia. Estonian Journal of Ecology, 60 (2), 111−131. DOI: 10.3176/eco.2011.2.03.
1.2.
2011
Sepp, M.; Palm, V.; Leito, A.; Päädam, K.; Truu, J. (2011). The effect of atmospheric circulation types and long-term trends on spring arrival of migratory birds in Estonia. Estonian Journal of Ecology, xx−xx.
3.4.
2011
Limane, B.; Muter, O.; Juhanson, J.; Truu, M.; Truu, J.; Nõlvak, H. (2011). Characterization of microbial community structure after application of different bioremediation approaches in TNT contaminated soil. Environmental Engineering 8th International Conference, 19-20 May 2011, Vilnius, Lithuania. , 188−194.
1.1.
2010
Abarenkov, K; Tedersoo, L; Nilsson, RH; Vellak, K; Saar, I; Veldre, V; Parmasto, E; Prous, M; Aan, A; Ots, M; Kurina, O; Ostonen, I; Jõgeva, J; Halapuu, S; Põldmaa, K; Toots, M; Truu, J; Larsson, K-H; Kõljalg, U (2010). PlutoF – a web based workbench for ecological and taxonomic research, with an online implementation for fungal ITS sequences. Evolutionary Bioinformatics, 189−196. DOI: 10.4137/EBO.S6271.
3.2.
2010
Lõhmus, K.; Truu, J.; Truu, M.; Kaar, E.; Ostonen, I.; Meel, S.;Kuznetsova, T.; Rosenvald, K.; Vares, A.; Kurvits, V.; Kanal, A.; Uri, V. (2010). Risosfääriprotsesside mõju metsaökosüsteemi kujunemisele erineva liigilise koosseisuga puistutes põlevkivikarjääride puistangutel [The impact of rhizosphere processes on the formation of forest ecosystems in reclaimed open cast oil shale mining areas]. Kaar, E; Kiviste, K. (Toim.). Maavarade kaevandamine ja puistangute rekultiveerimine Eestis (185−194). . Tartu: Eesti Maaülikool.
5.2.
2010
Nõlvak, H.; Sildvee, T.; Kriipsalu, M.; Truu, J. (2010). Assessment of potential of monitored natural attenuation (MNA) in oil-polluted subsurface. Linnaeus ECO-TECH´10: Linnaeus ECO-TECH´10, 22-24 November 2010 in Kalmar, Sweden.
5.2.
2010
Truu, Jaak; Preem, Jens-Konrad; Truu, Marika; Lõhmus, Krista; Mander, Ülo (2010). Assessment of bacterial community structure in soils from alder stands using pyrosequencing. Soil Metagenomics 2010: Soil Metagenomics 2010: Implications of next-generation DNA sequencing on microbial diversity research and soil ecology; Braunschweig, Germany; 8-10.12.2010. , 67−68.
5.2.
2010
Truu, J.; Viggor, S.; Jõesaar, M.; Heinaru, A. (2010). Isolation of alkane degrading bacterial strains from Baltic Sea coastal area. Proceedings of XXIX ECCO Meeting: XXIX ECCO Meeting, Istanbul (Turkey), 1-2 July 2010. , 41.
5.2.
2010
Krustok, I.; Truu, J. (2010). Fosfaati lahustavate bakterite isoleerimine tehnogeensest pinnasest [Isolation of phosphate solubilizing bacteria from technogenic soil]. Talveakadeemia 2010 üliõpilaste teadusartiklite konkursi kogumik: Talveakadeemia 2010, Viinistu konverentsi- ja kultuurikeskus, 26.-28.02.2010. Toim. Toonpere, P., 25−29.
1.1.
2009
Palm, Vello; Leito, Aivar; Truu, Jaak; Tomingas, Oliver (2009). http://www.ornisfennica.org/pdf/vol86-3/2Bakaloudis.pdf. Ornis Fennica, 86 (3), 97−108.
1.1.
2009
Nurk, K.; Zaytsev, I.; Talpsep, I.; Truu, J.; Mander, Ü. (2009). Bioaugmentation in a newly established LECA-based horizontal flow soil filter reduces the adaptation period and enhances denitrification. Bioresource Technology, 100 (24), 6284−6289. DOI: 10.1016/j.biortech.2009.07.023.
1.1.
2009
Truu, M.; Juhanson, J., Truu, J. (2009). Microbial biomass, activity and community composition in constructed wetlands. The Science of The Total Environment, 407 (13), 3958−3971. DOI: 10.1016/j.scitotenv.2008.11.036.
1.1.
2009
Truu, M.; Truu, J.; Heinsoo, K. (2009). Changes in soil microbial community under willow coppice: the effect of irrigation with secondary-treated municipal wastewater. Ecological Engineering, 35 (6), 1011−1020. DOI: 10.1016/j.ecoleng.2008.08.010.
1.1.
2009
Juhanson, J; Truu, J; Heinaru, E; Heinaru, A. (2009). Survival and catabolic performance of introduced Pseudomonas strains during phytoremediation and bioaugmentation field experiment. FEMS Microbiology Ecology, 70 (3), 446−455. DOI: 10.1111/j.1574-6941.2009.00754.x.
3.1.
2009
Limane, B.; Juhanson, J.; Truu, J., Truu, M.; Muter, O.; Versilovskis, A.; Dubova, L.; Zarina, Dz. (2009). Changes in microbial population affected by physico-chemical conditions of soils contaminated by explosives. Current Research Topics in Applied Microbiology and Microbial Biotechnology: II International Conference on Environmental, Industrial and Applied Microbiology (BioMicroWorld2007); Sevilla; 28.11-1.12.2007. Ed. Mendez-Vilas, A. World Scientific Publ Co Pte Ltd, 637−640.
5.2.
2009
Viggor, S.; Truu, J.; Mitt, M.; Merimaa, M.; Heinaru, A. (2009). Alkane degradation potential of Baltic Sea coastal planktonic bacteria. BAGECO 10, Programm & Abstract: BAGECO 10, Bacterial genetics and ecology- coexisting on a changing planet; Uppsala, Rootsi; 15-19.06.2009. Uppsala, Rootsi, P268−P268.
5.2.
2009
Rosenvald, Katrin; Truu, Marika; Kuznetsova, Tatjana; Ostonen, Ivika; Truu, Jaak; Uri, Veiko; Lõhmus, Krista (2009). Rhizosphere, fine-root, and soil parameters in a silver birch stand chronosequence on reclaimed oil shale mining area. Conference Programme & Abstracts: 6th International Symposium on Ecosystem Behaviour BIOGEOMON 2009; University of Helsinki, Finland; June 29 - July 3 2009. Ed. Ukonmaanaho, Liisa; Nieminen, Tiina M.; Starr, Mike. Helsinki: Finnish Forest Research Institute, 426−426. (Working Papers of the Finnish Forest Research Institute; 128).
5.2.
2009
Nõlvak, H.; Truu, J.; Kriipsalu, M. (2009). Assessment of monitored natural attenuation potential in oil-polluted subsurface. FEMS 3rd Congress of European Microbiologists: Microbes and Man - interdependence and future challenges: FEMS 3rd Congress of European Microbiologists: Microbes and Man - interdependence and future challenges.
5.2.
2009
Truu, J.; Viggor, S.; Mitt, M.; Merimaa, M.; Heinaru, A. (2009). Diversity of alkane degradating planktonic bacterial community in Baltic sea coastal area. FEMS 2009 Microbes and Man-interdependence and future challenges, Abstracts: FEMS 2009 3rd Congress of European Microbiologists; Gothenburg Sweden; June 28-July 2, 2009. Gothenburg, Sweden.
5.2.
2009
Truu, J.; Juhanson, J.; Heinaru, E.; Heinaru, A. (2009). Survival and catabolic performance of introduced bacterial strains during phytoremediation field experiment. COST Action 859 Phyto 2009 The Final International Conference on Phytotechnologies to promote sustainable land use and improve food safety: COST Action 859 Phyto 2009 The Final International Conference on Phytotechnologies to promote sustainable land use and improve food safety, Ascona, Switzerland, 11-16 October 2009. , 191.
5.2.
2009
Truu, M.; Truu, J. (2009). IMPACT OF LAND USE ON MICROBIAL COMMUNITIES IN ESTONIAN SOILS. 3rd Congress of European Microbiologists, Göteborg, Rootsi, 28.06-02.07.2009.
5.2.
2009
Truu, M.; Truu, J.; Juhanson, J.; Kutti, S. (2009). Microbial community biomass and structure in phosphorous removal filters based on oil shale ash. 3rd Wetland Pollutant Dynamics and Control - WETPOL2009: 3rd Wetland Pollutant Dynamics and Control - WETPOL2009. Ed. Josep M. Bayona, Joan García. Barcelona, 438−439.
5.2.
2009
Truu, Jaak; Preem, Jens-Konrad (2009). Trinucleotide simple sequence repeats in Pseudomonas fluorescens genome and possibilites to use them for subtyping of Pseudomonas species. ECCO COLLECTIONS: CELLULAR AND GENETIC DIVERSITY AND MICROBIAL COMMONS FOR THE RESEARCH COMMUNITY: European Culture Collections’ Organization (ECCO) XXVIII Annual Meeting, Gothenburg, Sweden; 2-3 July 2009. , x−x.
5.2.
2009
Nõlvak, H.; Truu, J. (2009). Assessment of potential of monitored natural attenuation (MNA) in oil-polluted subsurface. CREAM and RECETO Symposium: Microbial Degradation of Soil Pollutants – Processes and Impact: CREAM and RECETO Symposium: Microbial Degradation of Soil Pollutants – Processes and Impact; Kopenhaagen, Taani; 3-4.11.2009. , 24−24.
1.1.
2008
Palo, A.; Linder, M.; Truu, J.; Mander, Ü. (2008). The influence of biophysical factors and former land use on forest floristic variability on Saaremaa and Muhu islands, Estonia. Journal for nature conservation, 16, 123−134. DOI: 10.1016/j.jnc.2008.08.001.
1.1.
2008
Ivask, M.; Kuu, A.; Meriste, M.; Truu, J.; Truu, M.; Vaater, V. (2008). Invertebrate communities (Annelida and epigeic fauna) in three types of Estonian cultivated soils. European Journal of Soil Biology, 44, 532−540.
1.1.
2008
Truu, M.; Truu, J.; Ivask, M. (2008). Soil microbiological and biochemical properties for assessing the effect of agricultural management practices in Estonian cultivated soils. European Journal of Soil Biology, 44 (2), 231−237. DOI: 10.1016/j.ejsobi.2007.12.003.
1.1.
2008
Leito, Aivar; Truu, Jaak; Õunsaar, Maris; Sepp, Kalev; Kaasik, Are; Ojaste, Ivar; Mägi, Eve (2008). The impact of agriculture on autumn staging Eurasian Cranes (Grus grus) in Estonia. Agricultural and Food Science, 17 (1), 53−62.
1.2.
2008
Leito, Aivar; Truu, Jaak (2008). Development of the Barnacle Goose Branta leucopsis population in Estonia. Vogelwelt, 129, 239−243.
1.3.
2008
Leito, Aivar; Truu, Jaak; Põder, Indrek (2008). Hanikatsi laiu laialehise salumetsa haudelinnustiku võrdlus teiste sarnaste metsade haudelinnustikega Eestis. Hirundo : Eesti Ornitoloogiaühingu ajakiri, 21, 2, 73−86.
3.2.
2008
Truu, J. (2008). Mikrobioloogilised kollektsioonid Eestis [Microbial culture collections in Estonia]. Parmasto, E.; Viikberg, J. (Toim.). Eesti humanitaar- ja loodusteaduslikud kogud. Seisund, kasutamine, andmebaasid (215−221). . Tartu: Tartu Ülikooli Kirjastus.
3.2.
2008
Nurk, K.; Zaytsev, I.; Talpsep, I.; Truu, J.; Mander, Ü. (2008). Bioaugmentation in a newly established LWA-based horizontal flow soil filter reduces the adaptation period and enhances denitrification. proc.:11th international Conference on Wetland systems technology in Water Pollution Control, Nov. 1-7, 2008, 1: 11th international Conference on Wetland systems technology in Water Pollution Control, Nov. 1-7, 2008. Ed. Billore S., Dass P., Vymazal J., 392−399.
3.4.
2008
Truu, M.; Truu, J.; Juhanson, J. (2008). Overview of microbial biomass, activity and community composition in constructed wetlands. Publicationes Instituti Geographici Universitatis Tartuensis, 106: 3rd Annual Meeting of the European Chapter of the Society of Wetland Scientists. Ed. Mander, Ü. Tartu: Tartu University Press, 81−82.
3.4.
2008
Truu, J.; Truu, M.; Juhanson, J.; Kutti, S. (2008). Microbial community in phosphorius removal filters based on oil shale ash. Publicationes Instituti Geographici Universitatis Tartuensis, 106: 3rd Annual Meeting of the European Chapter of the Society of Wetland Scientists; Kuressaare; 29.06-3.07.2008. Ed. Mander, Ü. Tartu: Tartu University Press, 83−84.
5.1.
2008
Kriipsalu, M.; Oinberg, A.; Uri, U.; Truu, J.; Vill-Sulp, K. (2008). Closing of small dumpsites in Estonia- Focus on leachate, gas, and aftercare. 7th International Conference on Environmental Engineering, 1-3: 7th International Conference on Environmental Engineering, Vilnius, May 22-23, 2008. Ed. Cygas, D.; Froehner, KD. Vilnius: Vilnius Gediminas Technical University Press "Technika", 583−588.
5.2.
2008
Truu, M.; Truu, J.; Kriipsalu, M.; Nõlvak, H. (2008). Passive remediation approach for treatment of oil-polluted subsurface: a case study at former oil waste dump site. World Congress of Industrial Biotechnology, Hangzhou , Hiina, 18-23. mai 2008.
5.2.
2008
Truu, J.; Heinaru, E.; Heinaru, A.; Juhanson, J. (2008). Bioaugmentation efficiency in phytoremediation field experiment. World Congress of Industrial Biotechnology, Hangzhou , Hiina, 18-23. mai 2008.
5.2.
2008
Nõlvak, H.; Truu, J. (2008). Assessment of potential of monitored natural attenuation in oil polluted subsurface using molecular methods. International Life Sciences Students's Conference Book of abstracts: International Life Sciences Students's Conference; Warsaw, Poland; 10-14 September 2008. , 52.
5.2.
2008
Juhanson, J.; Truu, J.; Heinaru, E.; Heinaru, A. (2008). Feasibility of bioaugmentation during phytoremediation field experiment. Phytotechnologies in practice - biomass production, agricultural methods, legacy, legal and economomic aspects: Meeting of Working Group 4 "Integration and apllication of phytotechnologies" COST Action 859; Verneuil-en-Halatte, France; October 14-17, 2008. , 43.
5.2.
2008
Nõlvak, H.; Truu, J.; Kriipsalu, M. (2008). Asssessment of passive remediation approach for treatment of oil-polluted subsurface. The International Youth Science Environmental Forum of Baltic Region Countries "Ecobaltica 2008" Book of Proceedings: The International Youth Science Environmental Forum of Baltic Region Countries "Ecobaltica 2008"; St.-Peterburg, Russia; June 26-28, 2008. Ed. Fiodorov, M.P.; Hogland, W.; Rud, V.Yu. St. Peterburg: St.Petersburg State Polytechnic University Publishing House, 207.
5.2.
2008
Truu, J.; Vedler, E. (2008). Microbial culture collections in Estonia. Proceedings of the 27th Annual General Meeting of the European Culture Collections Organization: 27th Annual General Meeting of the European Culture Collections Organization, Ghent, Belgium, 10-11 June 2008. Ghent.
1.1.
2007
Juhanson, J.; Truu, J.; Heinaru, E.; Heinaru, A. (2007). Temporal dynamics of microbial community in soil during phytoremediation field experiment. Journal of Environmental Engineering and Landscape Management, 15 (4), 213−220.
1.1.
2007
Ostonen, Ivika; Lõhmus, Krista; Helmisaari, Heljä-Sisko; Truu, Jaak; Meel, Signe (2007). Fine root morphological adaptations in Scots pine, Norway spruce and silver birch along a latitudinal gradient in boreal forests. Tree Physiology, 27 (11), 1627−1634.
1.1.
2007
Piirsoo, Kai; Vilbaste, Sirje; Truu, Jaak; Pall, Peeter; Trei, Tiiu; Tuvikene, Arvo; Viik, Malle (2007). Origin of phytoplankton and the environmental factors governing the structure of microalgal communities in lowand streams. Aquatic Ecology, 41 (2), 183−194.
1.1.
2007
Ivask, M.; Truu, J.; Kuu, A.; Truu, M.; Leito, A. (2007). Earthworm communities of flooded grasslands in Matsalu, Estonia. European Journal of Soil Biology, 43 (2), 71−76. DOI: 10.1016/j.ejsobi.2006.09.009.
1.2.
2007
Vilbaste, S.; Truu, J.; Leisk, Ü.; Iital, A. (2007). Species composition and diatom indices in relation to environmental parameters in Estonian streams. Archiv für Hydrobiologie - Supplement, 161, 307−326.
1.2.
2007
Ziembińska, A.; Raszka, A.; Truu, J.; Surmacz-Górska, J.; Miksch, K. (2007). Molecular analysis of temporal changes of a bacterial community structure in activated sludge using denaturing gradient gel electrophoresis (DGGE) and fluorescent in situ hybridization (FISH). Polish Journal of Microbiology, 56 (2), 119−127.
3.1.
2007
Truu, J.; Heinaru, E.; Vedler, E.; Juhanson, J.; Viirmäe, M.; Heinaru, A. (2007). Formation of microbial conmunities in oil shale chemical industry solid wastes during and bioaugmentation. In: Heipieper, H.J. (Ed.). Bioremediation of Soils Contaminated with Aromatic Compounds (57−66). . Springer. (NATO Science Series; 76).
3.1.
2007
Lõhmus, K.; Kull, A.; Truu, J.; Truu, M.; Kaar, E.; Ostonen, I.; Meel, S.; Kuznetsova, T.; Rosenvald, K.; Uri, V.; Kurvits, V.; Mander, Ü. (2007). The reclamation of the North Estonian oil shale mining area. In: Mander, Ü.; Wiggering, H.; Helming, K. (Ed.). Multifunctional land use: Meeting future demands for landscape goods and services (387−401). . Berlin Heidelberg: Springer.
3.4.
2007
Kängsepp, P.; Truu, J.; Juhanson, J. (2007). The investigation of microbial community structure along a leachate treatment system based on filter-bed technology. Publicationes Instituti Geographici Universitatis Tartuensis, 104: 2nd International Symposium on Wetland Pollutnat Dynamics and Control WETPOL 2007; Tartu, 16-20.09.2007. Ed. Mander, Ülo; Kõiv, Margit; Vohla, Christina. Tartu: Tartu Ülikooli Kirjastus, 144−146.
3.4.
2007
Truu, M.; Truu, J.; Heinsoo, K. (2007). Soil microbial community response to the irrigation of secondary-treated municipal wastewater under a willow coppice. Publicationes Instituti Geographici Universitatis Tartuensis, 104: 2nd International Symposium on Wetland Pollutant Dynamics and Control WETPOL 2007,16-20.09.2007. Ed. Mander, Ülo; Kõiv, Margit; Vohla, Christina. Tartu: Tartu Ülikooli Kirjastus, 545−546.
3.4.
2007
Kriipsalu, M., Truu, J., Juhanson, J. (2007). An integrated approach for restoration of a leachate pond by using vegetation on supportive structures. Proceedings: 1st World Aqua Congress, 28-30 November 2007, New Delhi, India. Ed. Dr Prabhas Sinha, Sanjay Rana., 124−129.
5.2.
2007
Vedler, E.; Truu, J. (2007). Use of alignment independent and alignment-dependent methods for comparison of bacterial isolates from soil samples. Proceedings of the 26th Annual General Meeting of the European Culture Collections' Organisation: ECCO XXVI 'Reconciling scientific and regulatory demands'; Goslar, Saksamaa; 11-12.10.2007. , 61−61.
5.2.
2007
Vedler, E.; Truu, J. (2007). Use of alignment independent and alignment-dependent methods for comparison of bacterial isolates from soil samples. The 11th International Conference on Culture Collections; Goslar, Germany; 7-11.10.2007. , 267.
5.2.
2007
Truu, J.; Truu, M.; Juhanson, J.; Nõlvak, H.; Kriipsalu, M. (2007). Assessment of passive remediation approach for treatment of oil-polluted subsurface. II International Conference on Environmental, Industrial and Applied Microbilogy (BioMicroWorld 2007); Seville, Spain; 28 November - 1 December, 2007. , 591.
5.2.
2007
Heinaru, A.; Truu, J.; Juhanson, J.; Vedler, E.; Heinaru, E. (2007). In situ and on site bioremediation of polluted areas: bioaugmentation with genetically characterised bacteria. Proceedings of the Latvian Academy of Sciences. SectionB, Vol 61. Latvia, 168. (No 5).
5.2.
2007
Nurk, K.; Truu, J.; Zaytsev, I.; Põldvere, A.; Noorvee, E.; Karabelnik, K.; Madisson, M.; Nikopensius, K.; Mander, Ü. (2007). Nutrient accumulation and microbial parameters in LWA-based hybrid constructed wetlands. Publicationes Instituti Geographici Universitatis Tartuensis, 104: 2nd International Symposium on Wetland Pollutnat Dynamics and Control WETPOL 2007; Tartu; 16-20.09.2007. Ed. Mander, Ü.; Kõiv, M.; Vohla, C. Tartu: Tartu Ülikooli Kirjastus, 234−235.
5.2.
2007
Truu, J.; Kriipsalu, M.; Juhanson, J. (2007). The impact of plant growth on microbial community and water chemistry in free-water constructed wetlands. Publicationes Instituti Geographici Universitatis Tartuensis, 104: 2nd International Symposium on Wetland Pollutnat Dynamics and Control WETPOL 2007; Tartu, 16-20.09.2007. Ed. Mander, Ülo; Kõiv, Margit; Vohla, Christina. Tartu: Tartu Ülikooli Kirjastus, 543−544.
6.3.
2007
Nõlvak, H.; Truu, J.; Kriipsalu, M.; Kurnasov, A. (2007). Seiratava loodusliku tervenemise rakendamine saneerimismeetodina. Keskkonnatehnika, 7, 17−19.
1.1.
2006
Leito, A.; Truu, J.; Roosaluste, E.; Sepp, K.; Põder, I. (2006). Long-term dynamics of breeding birds in broad-leaved deciduous forest on Hanikatsi Island tn the West-Estonian archipelago. Ornis Fennica, 83 (3), 124−130.
1.1.
2006
Lõhmus, K.; Truu, J.; Truu, M.; Kaar, E.; Ostonen, I.; Alama, S.; Kuznetsova, T.; Rosenvald, K.; Vares, A.; Uri, V.; Mander, Ü. (2006). Black alder as a perspective deciduous species for reclaiming of oil shale mining areas. In: Brebba, C. A.; Mander, Ü. (Ed.). Brownfields III. Prevention, Assessment, Rehabilitation and Development of Brownfield Sites (87−97). . Southampton, Boston: Wessex Institute of Techonology Press. (WIT Transactions on Ecology and the Environment; 94). DOI: 10.2495/BF060091.
1.1.
2006
Ostonen, I.; Lõhmus, K.; Alama, S.; Truu, J.; Kaar, E.; Vares, A.; Uri, V.; Kurvits, V. (2006). Morphological adaptations of fine roots in scots pine (Pinus sylvestris L.), silver birch (Betula pendula roth.) and black alder (Alnus glutinosa (L.) Gaertn.) stands in recultivated areas of oil shale mining and semicoke hills. Oil Shale, 23 (2), 187−202.
1.1.
2006
Lõhmus, K.; Truu, M.; Truu, J.; Ostonen, I.; Kaar, E.; Vares, A.; Uri, V.; Alama, S.; Kanal, A. (2006). Functional diversity of culturable bacterial communities in the rhizosphere in relation to fine-root and soil parameters in alder stands on forest, abandoned agricultural, and oil-shale areas. Plant and Soil, 283, 1−10.
1.2.
2006
Ivask, M.; Kuu, A.; Truu, M.; Truu, J. (2006). The effect of soil type and soil moisture on earthworm communities = Mullatüübi ja niiskusetingimuste mõju põllumuldade vihmaussikooslustele. Agraarteadus, XVII (1), 3−11.
2.2.
2006
Leito, A.; Keskpaik, J.; Ojaste, I.; Truu, J. (2006). The Eurasian Crane in Estonia. Tartu: Eesti Loodusfoto.
2.2.
2006
Leito, Aivar; Keskpaik, Jri; Ojaste, Ivar; Truu, Jaak; Ader, Arne; Leito, Tiit; Peterson, Kaja; Nowald, Gnter; Veide, Aivar (2006). The Eurasian crane in Estonia. Tartu: Eesti Loodusfoto.
3.4.
2006
Nurk, K.; Teiter, S.; Lõhmus, K.; Truu, J.; Mander, Ü. (2006). The influence of site conditions on microbial indicators andgreenhouse gas emissions from a riparian buffer zone and a horizontal subsurface flow constructed wetland. Proc: 10th International Conference on Wetland systems technology in Water Pollution Control, Sept. 23-29, 2006: 10th International Conference on Wetland systems technology in Water Pollution Control, Sept. 23-29, 2006. Ed. Diaz V., Vymazal J., 965−975.
3.5.
2006
"Truu, Marika;Truu, Jaak;Ivask, Mari" (2006). Mikrobioloogiliste näitajate kasutamine agrotehniliste võtete mõju hindamisel Eesti põllumuldades. Kaasaegse ökoloogia probleemid: loodushoiu majandushoovad : Eesti X Ökoloogiakonverentsi lühiartiklid : Tartu, 27.-28. aprill, 2006. Tartu : Eesti Ökoloogiakogu, 200−204.
3.5.
2006
Ivask, M.; Koorberg, P.; Kuu, A.; Truu, J. (2006). Vihmaussikoosluste parameetrite kasutamine indikaatorina põllumajandusliku keskkonnatoetuse hindamisel. Kaasaegse ökoloogia probleemid : loodushoiu majandushoovad : Eesti X Ökoloogiakonverentsi lühiartiklid : Tartu, 27.-28. aprill, 2006: Eesti X Ökoloogiakonverents; Tartu; 27-28 Aprill, 2006. Tartu : Eesti Ökoloogiakogu: Teadusühing IM SAARE, 51−56.
5.2.
2006
Truu, J.; Juhanson, J.; Heinaru, E.; Vedler, E.; Merimaa, M.; Heinaru, A. (2006). Monitoring changes in microbial community structure in oil shale chemical industry solid waste during phytoremediation and bioaugmentation. International Symposium on Environmental Biotechnology; Leipzig, Germany; 9-14 July, 2006. , 411.
5.2.
2006
Truu, J.; Heinaru, E.; Heinaru, A. (2006). Culture collection of environmental microorgansims - the source for development of new environmental technologies. Proceedings of the Annual General Meeting of the European Culture Collections' Organization: ECCO XXV, Budapest, Hungary, June 7-10, 2006. Inkart Kft, 186.
5.2.
2006
Talpsep, E.; Truu, J.; Arro, K.; Heinaru, A. (2006). Microbial community analysis of the Lake Raadi using 16S rDNA clonal library and culture based methods. 2nd FEMS Congress of European Microbiologists; Madrid, Spain; July 4-8 2006. , 182.
5.2.
2006
Truu, J.; Truu, M.; Heinsoo, K. (2006). Influence of effluent irrigation on soil microbiological parameters under willow copice. Phytotechnologies lessons from pilot and field scale. Phytotechnologies - lessons from pilot and field scale: COST 859 (Phytotechnologies to promote sustainable land use and improve food safety),WG4 meeting; Sintra, Lisbon; 27th-29th April 2006. , 34.
6.3.
2006
Ivask, M.; Kuu, A.; Truu, M.; Truu, J. (2006). Mullatüübi ja niiskusetingimuste mõju põllumuldade vihmaussikooslustele = The effect of soil type and soil moisture on earthworm communities. Agraarteadus, 1, 3−11.
1.1.
2005
Wulff, A.; Vilbaste, S.; Truu, J. (2005). Depth distribution of photosynthetic pigments and diatoms in the sediments of a microtidal fjord. Hydrobiologia, 534, 117−130.
1.1.
2005
Truu, J.; Nurk, K.; Juhanson, J.; Mander, U. (2005). Variation of microbiological parameters within planted soil filter for domestic wastewater treatment. Journal of Environmental Science and Health Part A-Toxic/Hazardous Substances & Environmental Engineering, 40, 1191−1200.
1.1.
2005
Heinaru, E.; Merimaa, M.; Viggor, S.; Lehiste, M.; Leito, I.; Truu, J.; Heinaru, A. (2005). Biodegradation efficiency of functionally important populations selected for bioaugmentation in phenol- and oil-polluted area. FEMS Microbiology Ecology, 51 (3), 363−373.
1.1.
2005
Nurk, K.; Truu, J.; Truu, M.; Mander, U. (2005). Microbial characteristics and nitrogen transformation in planted soil filter for domestic wastewater treatment. Journal of Environmental Science and Health Part A-Toxic/Hazardous Substances & Environmental Engineering, 40, 1201−1214.
1.1.
2005
Leito, A.; Ojaste, I.; Truu, J.; Palo, A. (2005). Nest site selection of the Eurasian Crane Grus grus in Estonia: an analysis of nest record cards. Ornis Fennica, 82 (2), 44−54.
2.2.
2005
Leito, A.; Keskpaik, J.; Ojaste, I.; Truu, J. (2005). Sookurg. Tartu: Eesti Loodusfoto.
3.2.
2005
Truu, M.; Truu, J.; Ivask, M. (2005). Mahe-ja tavatootmise mõju mikroobsetele protsessidele põllumuldes [Impact of agricultural managementnpractice on soil microbial community]. Lillak, R.; Viiralt, R.; Geherman, V.; Linke, A. (Toim.). Eesti Põllumajandusülikooli teadustööde kogumik (12−14). . Tartu: Estonian Agricultural University.
3.4.
2005
Truu, J.; Juhanson, J.; Kriipsalu, M.; Seene, M. (2005). Phytoremediation of landfill leachate in constructed wetland. Proceedings of Kalmar EcoTech´ 05: Kalmar EcoTech´ 05, Kalmar, Sweden, November 28-30. Ed. Hogland, W.; Broby, T. Kalmar, Sweden, 441−446.
3.4.
2005
Truu, J.; Juhanson, J.; Heinaru, E.; Vedler, E.; Merimaa, M.; Heinaru, A. (2005). Impact of phytoremediation and bioaugmentation on microbial community in oil shale chemical industry solid waste. Proceedings of Kalmar EcoTech´ 05: Kalmar EcoTech´05; Kalmar, Sweden; 28-30 November, 2005. Ed. Hogland, W.; Broby, T. Kalmar, Sweden, 433−439.
3.4.
2005
Viggor, Signe; Heinaru, Eeva; Truu, Jaak; Heinaru, Ain (2005). Kinetics of phenol degradation by selected bacterial strains with different genetic properties. Proceedings Kalmar ECO-TECH'05: Kalmar ECO-TECH'05, Kalmar,Swedwn, 28-30 November 2005. Kalmar, Sweden, 315−324.
5.2.
2005
Lõhmus, K., Truu, M., Truu, J., Ostonen, I., Alama, S., Vares, A., Uri, V., and Kanal, A. (2005). Alders create favourable environment for microbes at their soil-root interface in abandoned agricultural areas and opencast oil shale mining spoil. Plant nutrition for food security, human health and environment protection.: Fifteenth International Plant Nutrition Colloquium, Beijing, 2005. Ed. C. J. Li et al.,., 492−493.
5.2.
2005
Nurk, K.; Truu, J.; Mander, Ü. (2005). Impact of enhanced aeration on the microbial characteristics of a horizontal flow planted soil filter treating domestic wastewater. 9th International Symposium on wetland Pollutant Dynamics and Control, Universiteit Ghent, 2005: 9th International Symposium on wetland Pollutant Dynamics and Control WETPOL 2005; Ghent; 4-8.09.2005. Universiteit Gent. , 126−128.
5.2.
2005
Heinaru, E.; Merimaa, M.; Lehiste, M.; Truu, J.; Heinaru, A. (2005). Functional co-adaptation of phenol hydroxylase and catechol 2,3-dioxygenase genes of different catabolic pathways in phenol- and p-cresol-degrading bacteria. 8th Symposium on Bacterial Genetics & Ecology: Lyon, France; 26-29 June, 2005. Lyon, 54.
5.2.
2005
Merimaa, M.; Truu, J.; Heinaru, E. (2005). Polyphasic taxonomic study of pseudomonads: reclassification of Pseudomonas corrugata strain PC17 as Pseudomonas fluorescens. ECCO XXIV European Culture Collections: resources for biology and biotechnology; Riga, Latvia; 25-27 May, 2005. , 49−50.
1.1.
2004
Vares, A.; Lohmus, K.; Truu, M.; Truu, J.; Tullus, H.; Kanal, A. (2004). Productivity of black alder (Alnus glutinosa (L.) Gaertn.) plantations on reclaimed oil-shale mining detritus and mineral soils in relation to rhizosphere conditions. Oil Shale, 21 (1), 43−58.
1.1.
2004
Sepp, K.; Mikk, M.; Mand, M.; Truu, J. (2004). Bumblebee communities as an indicator for landscape monitoring in the agri-environmental programme. Landscape and Urban Planning, 67, 173−183.
1.3.
2004
Leito, Aivar; Truu, Jaak (2004). Valgepõsk-lagle (Branta leucopsis) leviku ja arvukuse muutused Eestis. Estonia Maritima, 6, 111−127.
1.3.
2004
Leito, Aivar; Õunsaar, Maris; Truu, Jaak (2004). Sügisrändel peatuvate sookurgede levik ja arvukus Hiiumaal ning seos põllumajandusega. Hirundo : Eesti Ornitoloogiaühingu ajakiri, 17 (1), 19−24.
2.3.
2004
Truu, J. (2004). Oil shale industry wastewater: impact on river microbial community and possibilities for bioremediation. (Doktoritöö, Tartu Ülikool; Bioloogia-geograafiateaduskond; Geneetika õppetool). Tartu: Tartu University Press.
3.1.
2004
Truu, J.; Heinaru, E.; Vedler, E.; Viirmäe, M.; Juhanson, J.; Talpsep, E.; Heinaru, A. (2004). Remediation of oil shale chemical industry solid wastes using phytoremediation and bioaugmentation. Proceedings of the European Symposium on Environmental Biotechnology, Oostende, Belgium, April 25 - 28, Balkema: European Symposium on Environmental Biotechnology, Oostende, Belgium, April 25 - 28, Balkema. , 467−471.
3.2.
2004
Jaagus, J.; Truu, J. (2004). Climatic regionalisation of Estonia based on multivariate exploratory techniques. In: Tiia Kaare; Jaan-Mati Punning (Ed.). Estonia. Geographical Studies (41−55). . Tallinn: Estonian Academy Publishers.
3.2.
2004
Lõhmus, K.; Truu, M.; Ostonen, I.; Truu, J.; Kanal, A.; Ivask, M.; Alama, S.; Vares, A.; Uri, V.; Külla, T.; Kurvits, V. (2004). Puuliigi ja mulla koosmõju risosfääriprotsessidele [Co-effect of tree species and soil on rhizosphere processes]. Reintam, L. (Toim.). Muld ökosüsteemis, seire ja kaitse (118−142). . Tartu- Tallinn: Eesti Teaduste Akadeemia Kirjastus.
3.2.
2004
Leito, A.; Ojaste, I.; Truu, J.; Keskpaik, J.; Palo, A. (2004). Sookure pesitsemine Eestis. Eesti Looduseuurijate Seltsi aastaraamat (157−189). . Tartu: Eesti Looduseuurijate Selts.
5.2.
2004
Viggor, Signe; Heinaru, Eeva; Truu, Jaak; Heinaru, Ain (2004). Comparison of kinetic parameters for phenol- and p-cresol-degrading activity. In: NATO Advanced Research Workshop. Bioremediation of soils contaminated with aromati compounds: effects of rhizospher, bioavailability, gene regulation and stress adaptation (52). Bioremediation of soils contaminated with aromati compounds: effects of rhizospher, bioavailability, gene regulation and stress adaptationTartu, Estonia, 1-3 July 2004. Tartu, Estonia.
1.1.
2003
Leito, A.; Truu, J.; Leivits, A.; Ojaste, I. (2003). Changes in distribution and numbers of the breeding population of the Common Crane Grus grus in Estonia. Ornis Fennica, 80 (4), 159−171.
1.1.
2003
Vilbaste, S.; Truu, J. (2003). Distribution of benthic diatoms in relation to environmental variables in lowland streams. Hydrobiologia, 493, 81−93.
1.1.
2003
Jaagus, J.; Truu, J.; Ahas, R.; Aasa, A. (2003). Spatial and temporal variability of climatic seasons on the East European Plain in relation to large-scale atmospheric circulation. Climate Research, 23 (2), 111−129.
1.1.
2003
Truu, J.; Talpsep, E.; Heinaru, E.; Vedler, E.; Heinaru, A. (2003). Phytoremediation of solid oil shale waste from the chemical industry. Acta Biotechnologica, 23, 301−307.
1.1.
2003
Truu, J.; Talpsep, E.; Vedler, E.; Heinaru, E.; Heinaru, A. (2003). Enhanced biodegradation of oil shale chemical industry solid wastes by phytoremediation and bioaugmentation. Oil Shale, 20 (3), 421−428.
3.4.
2003
Kärme, L.; Truu, J.; Talpsep, E.; Heinaru, A. (2003). Purtse jõe vesikonna vee ja setete mikroobikoosluste analüüs. T. Frey (Toim.). Kaasaegse ökoloogia probleemid (110−116). . Teadusühing IM SAARE.
3.4.
2003
Talpsep, E.; Truu, J.; Arro, K.; Heinaru, A. (2003). Raadi järve bakterikoosluse mitmekesisus. Kaasaegse ökoloogia probleemid. Toim. T. Frey. Teadusühing IM SAARE, 320−325.
3.4.
2003
Truu, J.; Kärme, L.; Vedler, E.; Talpsep, E.; Heinaru, E.; Viirmäe, M.; Heinaru, A. (2003). Taimestiku ja looduslike mikroobide kooskasutamine saasteainete biodegradatsiooni võimendamiseks poolkoksis. Kaasaegse ökoloogia probleemid. Toim. T. Frey. Teadusühing IM SAARE, 334−337.
3.5.
2003
Vilbaste, Sirje; Truu, Jaak (2003). Keskkonnafaktorite mõju jõgede perifüütoni ränivetikate levikule Lääne-Eesti neljas vesikonnas. Kaasaegse ökoloogia probleemid: Eesti IX Ökoloogiakonverents, Tartu, 11.-12. aprill, 2003. Toim. T. Frei. Tartu: Teadusühing IM SAARE, 338−343.
3.5.
2003
Ivask, M.; Truu, J.; Kuu, A.; Jaanimäe, J. (2003). Niitude vihmaussikoosluste mitmekesisus. IX Eesti Ökoloogiakonverents "Eesti ökoloogia globaliseeruvas maailmas": IX Eesti Ökoloogiakonverents; Tartu; 11-12 Aprill, 2003. Teadusühing "IM Saare", 43−50.
5.2.
2003
Truu, M.; Truu, J.; Lõhmus, K.; Ivask, M; Kanal, A. (2003). Microbial activity, biomass and community structure in soil-root interface and bulk soil under Scots pine, Norway spruce and silver birch. FEMS 2003 - 1st Congress of European Microbiologists; Ljubljana, Slovenia; June 29 - July 3, 2003. Slovenia, 425.
5.2.
2003
Lõhmus, K.; Kanal, A.; Truu, J.; Truu, M.; Vares, A.; Ostonen, I.; Mander, Ü. (2003). Rhizosphere effect on distribution P, B, Pb and Cd in the root zone of tree seedlings in reclaimed oil-shale mining detritus. Proceedings 7th International Conference on the Biogeochemistry of Trace Elements, 4: 7th International Conference on the Biogeochemistry of Trace Elements; Uppsala, Sweden; 15-19 June, 2003. Ed. Cobran, R. Sweden, 157−158.
5.2.
2003
Leito, Aivar; Truu, Jaak; Keskpaik, Jüri (2003). Breeding habitat selection by Common Crane in Estonia. Vth European Crane Conference: Vth European Crane Conference, 10-13 April 2003, Sweden. Preface, Programme, Abstracts. , 33.
1.1.
2002
Truu, J.; Heinaru, E.; Talpsep, E.; Heinaru, A. (2002). Analysis of river pollution data from low-flow period by means of multivariate technique. A case study from the oil-shale industry region, Northeastern Estonia. Environmental Science and Pollution Research, 1, 8−14.
1.2.
2002
Truu, J.; Talpsep, E.; Heinaru, E.; Heinaru, A. (2002). Self-purification processes in Estonian rivers receiving sewage from oil shale processing industry. Archiv für Hydrobiologie, 141, 459−469.
3.4.
2002
Heinaru, A.; Heinaru, E.; Talpsep, E.; Truu, J. (2002). Application of data from field-and labscale microbiological studies for treatment of phenolic leachate in natural systems. KALMAR ECO-TECH'01, leachate and Wastewater Treatment with High-Tech and Natural systems. Kalmar, 147−150.
5.2.
2002
Jaagus, J.; Truu, J.; Ahas, R.; Aasa, A. (2002). Spatial and temporal variability of climatic seasons on the East European Plain in relation to large-scale atmospheric circulation. Abstracts: 4th European Conference on Applied Climatology (ECAC); Brussels; 12.-15.11.2002. Brussels: Royal Meteorological Institute Belgium, 245.
1.1.
2001
Heinaru, E.; Viggor, S.; Vedler, E.; Truu, J.; Merimaa, M.; Heinaru, A. (2001). Reversible accumulation of p-hydroxybenzoate and catechol determines the sequential decomposition of phenolic compounds in mixed substrate cultivations in pseudomonads. FEMS Microbiology Ecology, 37 (1), 79−89.
3.1.
2001
Mänd, M.; Sepp, K.; Truu, J. (2001). Landscape structure and bumble bee communities. In: P. Benedek, K.W. Richards (Ed.). VIII International Symposium on Pollination - Pollination: Integrator of Crops and Native Plant Systems (159−164). . Leuven, Belgium: ISHS. (Acta Horticulturae; 561).
3.4.
2001
Kuu, A.; Ivask, M.; Truu, J. (2001). Diversity of soil invertebrates in ecologically and conventionally managed soils. IALE European Conference 2001. Development of European Landscapes. Conference Proceedings, Vol II: IALE European Conference 2001. Development of European Landscapes; June 30 - July 2, 2001, Stockholm ; July 3-6, 2001, Tartu. Tartu, 706−712. (Publicationes Instituti Geographici Universitatis Tartuensis; 92).
3.4.
2001
Truu, J., Truu, M., Lõhmus, K., Ostonen, I, Ivask, M, Kanal, A. (2001). Structure and activity of microbial communities in soil-root interface and bulk soil in coniferous and decidous stands. Roots the dynamics interface between plants and the Earth: 6th ISRR Symposium; Nagoya, Japan; 11.-15.11.2001. , 402−403.
3.4.
2001
Ivask, Mari; Truu, Jaak; Truu, Marika; Sepp, Kalev (2001). Effect of agricultural management practices on soil biota. IALE European Conference 2001 "Development of European Landscapes" : Conference proceedings. 2, 688−693.
3.4.
2001
Sepp, K.; Mänd, M.; Truu, J. (2001). The influence of landscape pattern on bumble bee communities. IALE European Conference 2001 "Development of European Landscapes" : Conference proceedings. 1. , 89−92.
5.2.
2001
Heinaru, E.; Viggor, S.; Truu, J.; Heinaru, A. (2001). Reversible accumulation of intermediates determines the sequential decomposition of phenolic compounds from their mixtures by pseudomonads. In: ISME-9, Interactions in the microbial world, Final programme and abstracts (124). Amsterdam, Netherland 26-31 August 2001.
1.1.
2000
Vilbaste, S.; Sundback, K.; Nilsson, C.; Truu, J. (2000). Distribution of benthic diatoms in the littoral zone of the Gulf of Riga, the Baltic Sea. European Journal of Phycology , 35 (4), 373−385.
1.1.
2000
Heinaru, E.; Truu, J.; Stottmeister, U.; Heinaru, A. (2000). Three types of phenol and p-cresol catabolism in phenol- and p-cresol-degrading bacteria isolated from river water continuously polluted with phenolic compounds. FEMS Microbiology Ecology, 31 (3), 195−205.
1.2.
2000
Ivask, M; Truu, M.; Truu, J.; Lõhmus, K.; Ostonen, I. (2000). Earthworm Lumbricidae communities in alder and aspen forest: three case studies. BALTIC FORESTRY, 6 (1), 74−77.
5.2.
2000
Heinaru, A.; Mäe, A.; Truu, J.; Peters, M.; Nurk, A.; Talpsep, E. (2000). Survival and detection of nonindigeneous Pseudomonas putida in aquatic microcoms. Conference of the Estonian Society for Microbiology; Tartu, Estonia; 12.05.2000. Tartu: Tartu Ülikooli Kirjastus, 13.
5.2.
2000
Ivask, M.; Truu, J.; Truu, M. (2000). Maakasutuse mõju mullaelustikule. Loodusteaduslikud ülevaated Eesti Maa päeval : Eesti VIII ökoloogiakonverentsi lühiartiklid : Tartu, 26.-27. aprill 2000: Eesti ökoloogiakonverents; Tartu, Eesti; 26.-27.04.2000. , 49−55.
1.1.
1999
Koljalc, S.; Sults, I.; Raukas, E.; Truu, J.; Ustav, M.; Mikelsaar, M. (1999). Distribution of Acinetobacter baumannii in a neurointensive care unit. Scandinavian Journal of Infectious Diseases, 31 (2), 145−150.
1.1.
1999
Truu, J.; Talpsep, E.; Heinaru, E.; Stottmeister, U.; Wand, H.; Heinaru, A. (1999). Comparison of API 20NE and Biolog GN identification systems assessed by techniques of multivariate analyses. Journal of Microbiological Methods, 36 (3), 193−201.
1.2.
1999
Kanal, A.; Kuldkepp, P.; Truu, J. (1999). Microflora activity and chemical properties of Podzoluvisol in field experiment with different manures. Archives of Agronomy and Soil Science, 44, 507−521.
1.2.
1999
Ivask, M; Truu, J.; Truu, M.; Lõhmus, K.; Ostonen, I. (1999). The EarthwormCommunities and Microbial Activities in Coniferous Forests of Estonia. BALTIC FORESTRY, 5 (2), 32−36.
1.3.
1999
Ivask, M.; Truu, J.; Lõhmus, K.; Truu, M.; Ostonen, I. (1999). Mõnede lagundajakoosluste struktuur ja aktiivsus kuusikutes ja männikutes. Forestry Studies / Metsanduslikud Uurimused, 104−110.
1.1.
1998
Truu, J.; Noges, T.; Kunnis, K.; Truu, M. (1998). Incorporation of spatial structure into the analysis of relationships between environment and marine microbiological parameters. Hydrobiologia, 363, 283−288.
1.1.
1998
Ivask, M.; Truu, J. (1998). The relationship of Estonian earthworms to local habitat and soil factors. Pedobiologia, 42 (4), 378−384.
1.1.
1997
Talpsep, E.; Heinaru, E.; Truu, J.; Laht, T.; Heinaru, A.; Wand, H.; Stottmeister, U. (1997). Functional dynamics of microbial populations in waters contaminated with phenolic leachate. Oil Shale, 14 (4), 435−453.
1.1.
1997
Truu, J.; Alamae, T.; Heinaru, E.; Talpsep, E.; Kokassaar, U.; Heinaru, A.; Tenno, T. (1997). Impact of oil shale mine water on microbiological and chemical composition of north-eastern Estonian rivers. Oil Shale, 14 (4), 526−532.
3.2.
1996
Truu, J.; Tasa, A.; Tooming, A.; Roose, T. (1996). Investigation of nitrogen cycle components on watershed of river Porijõgi. In: Alekand, K. (Ed.). Aineringe uuringud põllumajanduslikel valgaladel (39−46). . Tartu: Eesti Põllumajandusülikool. (Transactions of Estonian Agricultural University; 186).
3.4.
1995
Laht, T.; Talpsep, E.; Heinaru, E.; Truu, J.; Peters, M.; Wand, H.; Stottmeister, U.; Heinaru, A. (1995). Population genetics of toxic chemical degrading bacteria in polluted environment. Environmental Research in Finland Today: Proceedings Second Finnish Conference of Environmental Sciences. Helsinki. Finland, 33−36.
1.09.2021

Otsi projekti

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ProgrammLiikNumberNimiProjekti algusProjekti lõppVastutav täitjaAsutusFinantseerijapoolne rahastamine
1.2.3.4.MLTOM18431R (813114)A glimpse into the Arctic future: equipping a unique natural experiment for next-generation ecosystem research01.06.201931.12.2023Ivika Ostonen-MärtinTartu Ülikool, Loodus- ja täppisteaduste valdkond, ökoloogia ja maateaduste instituut232 069,68 EUR
SFSF0180026s08Balti mere õliga reostatud vee mikroobikoosluste kataboolne potentsiaal ja selle ökosüsteemi bakterite biodegradatiivsete plasmiidide genoomi organisatsioon ja evolutsioon01.01.200831.12.2013Ain HeinaruTartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Molekulaar- ja Rakubioloogia Instituut629 639,53 EUR
TKSLTOM16131T (TK131)Globaalmuutuste ökoloogia looduslikes ja põllumajanduskooslustes (TK131)01.01.201601.03.2023Martin ZobelTartu Ülikool, Loodus- ja täppisteaduste valdkond, ökoloogia ja maateaduste instituut3 198 027,47 EUR
IUTIUT2-16Globaalne soojenemine ja maastike aineringe. Maastike struktuuri ja funktsioonide muutused seoses globaalse kliima soojenemise ja inimtegevusega ning aineringe modelleerimine ja ökotehnoloogiline reguleerimine01.01.201331.12.2018Ülo ManderTartu Ülikool, Loodus- ja täppisteaduste valdkond, ökoloogia ja maateaduste instituut2 520 000,00 EUR
TKF11100PKTF (TK107)Keskkonnamuutustele kohanemise tippkeskus01.01.201131.12.2015Ülo NiinemetsEesti Maaülikool; Eesti Maaülikool, Põllumajandus- ja keskkonnainstituut; Tallinna Tehnikaülikool, Matemaatika-loodusteaduskond; Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Tehnoloogiainstituut; Tartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut3 054 552,95 EUR
HLKHLK04-5Looduslike ja laboratoorsete mikroobitüvede kollektsioon01.01.200431.12.2008Jaak TruuTartu Ülikool, Bioloogia-geograafiateaduskond; Tartu Ülikool, Loodus- ja tehnoloogiateaduskond131 365,79 EUR
SFSF0180127s08Maastike aineringe muutuvates kliima- ja maakasutuse tingimustes ning selle ökotehnoloogiline reguleerimine01.01.200831.12.2012Ülo ManderTartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut1 058 012,44 EUR
2.1.1.LLTMR19611 Mikroobikoosluste analüüs31.10.201931.12.2019Jaak TruuTartu Ülikool, Loodus- ja täppisteaduste valdkond, molekulaar- ja rakubioloogia instituut7 999,00 EUR
SFSF0182562As03Mikroobipopulatsioonide biodegradatiivne potentsiaal01.01.200331.12.2007Ain HeinaruTartu Ülikool, Bioloogia-geograafiateaduskond376 567,44 EUR
ETFETF7827Mikroobse biodegradatsiooni genoomne ja metagenoomne uurimine: Balti mere vee näitel01.01.200931.12.2012Ain HeinaruTartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Molekulaar- ja Rakubioloogia Instituut; Tartu Ülikool, Loodus- ja tehnoloogiateaduskond47 121,20 EUR
SFSF_0182562As03Mikroorganismide geeniregulatsioon ning geneetilise mitmekesisuse kujunemise molekulaarsed mehhanismid muutuvates keskkonnatingimustes01.01.200331.12.2007Ain HeinaruTartu Ülikool, Bioloogia-geograafiateaduskond0,00 EUR
1.2.3.6.SLTOM16383Mulla elurikkuse ja ökosüsteemi teenuste kohandamineEuroopa agroökosüsteemides kliimamuutuste tingimustes01.01.201731.05.2020Jaak TruuTartu Ülikool, Loodus- ja täppisteaduste valdkond, ökoloogia ja maateaduste instituut100 000,00 EUR
PRGPRG548Nafta biolagunemisega seotud mikrobioom Läänemeres01.01.201931.12.2023Jaak TruuTartu Ülikool, Loodus- ja täppisteaduste valdkond, molekulaar- ja rakubioloogia instituut714 250,00 EUR
MUULLOMR08057Naftasaaduste terminaali territooriumil reostuse leviku ja võimalike saneerimismeetodite uurimine.15.04.200815.12.2008Jaak TruuTartu Ülikool5 221,65 EUR
MUUMBGMR05103Naftasaadustega saastunud pinnase loodusliku bioloogilise isepuhastusvõime kasutamine saneerimismeetodina01.09.200431.03.2007Jaak TruuTartu Ülikool39 829,61 EUR
ETFETF6603Passiivse remediatsiooni rakendamine naftasaadustega saastunud pinnase puhastamiseks01.01.200631.12.2008Jaak TruuTartu Ülikool; Tartu Ülikool, Loodus- ja tehnoloogiateaduskond25 600,44 EUR
MUUSLOOM12076T (3.2.0801.11-0026)Ravimijäägid ja sünteetilised nanoosakesed reovees: mõju reoveepuhastusprotsessile ja ravimresistentsuse geenide levikule keskkonnas01.01.201231.08.2015Jaak TruuTartu Ülikool; Tartu Ülikool, Loodus- ja tehnoloogiateaduskond370 000,00 EUR
ETFETF6011Risosfääriprotsesside mõju metsaökosüsteemi kujunemisele erineva liigilise koosseisuga puistutes põlevkivikarjääride puistangutel01.01.200431.12.2007Krista LõhmusTartu Ülikool, Bioloogia-geograafiateaduskond59 593,92 EUR
ETFETF9387Toitainete ärakanne ning denitrifikatsioon parasvöötme põllumajandusmaastikel01.01.201231.12.2012Kaido SoosaarTartu Ülikool, Loodus- ja tehnoloogiateaduskond, Tartu Ülikooli Ökoloogia- ja Maateaduste Instituut17 400,00 EUR
ETFETF5682Õli ja fenooliga saastunud poolkoksialade bio- ja fütoremediatsiooni geneetiline mõju mikroobipopulatsioonide moodustumisele01.01.200431.12.2007Ain HeinaruTartu Ülikool65 307,78 EUR
1.2.3.4.MLTOM16030RÕlireostustele reageerimise kompleksmeetmed ja nende mõju keskkonnale01.03.201631.08.2019Jaak TruuTartu Ülikool, Loodus- ja täppisteaduste valdkond, ökoloogia ja maateaduste instituut396 837,00 EUR